Nitratidesulfovibrio vulgaris RCH1: Deval_1224
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Entry
Deval_1224 CDS
T02064
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Deval_1224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvg03021
]
Deval_1224
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_1224
Enzymes [BR:
dvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Deval_1224
Transcription machinery [BR:
dvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Deval_1224
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Deval_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Spectrin_7
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADP86385
LinkDB
All DBs
Position
1409457..1410500
Genome browser
AA seq
347 aa
AA seq
DB search
MLIKQGDRLINTRNWSELVKPEQISRDGEVSDTMYGKFVCEPLERGYATTIGNAMRRVLL
SSLQGAAFVAVKISGVQHEFTTIPGVLEDVTDVVLNLKQVRLAMDTEEPQYLELKVDKRG
AITAGDVRTNQHVMVLNPDQHIATLTEDIELTFELEVRMGKGYVPADMHEGLSEEIGLIK
LDASFSPVRKVAYTVEQARVGQMTNYDKLILEVWTDGSVSPEDAIAYSAKIIKDQISVFI
NFDERISGENSNGSADSGEFNEHLFKSIDELELSVRATNCLKSANIALVGELVQKSENEM
LKTKNFGRKSLDEIRRVLGDMGLDFGTKVDGFEKKYQEWKRKQQHEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaacaaggcgacaggcttatcaacacgcggaactggtcggaactggtcaag
ccggagcagatctcccgggatggcgaagtctccgacaccatgtacggaaagttcgtctgc
gagcctctggagcgcgggtatgcaacgaccatcggcaatgccatgcgtcgcgtgcttctc
tcttctcttcagggtgctgcgttcgtggcggtcaagatctcgggcgtacagcacgagttc
accaccatccccggcgtgctcgaagacgtgaccgatgtcgtgctgaacctcaagcaggtt
cgtcttgccatggacaccgaagagccccagtatctggagctcaaggtggacaagaggggc
gcgatcaccgctggtgacgtaagaaccaaccagcatgtcatggttctcaaccctgatcag
catatcgcgaccctgaccgaggacatcgagctcaccttcgagctcgaggtccgcatgggc
aagggctacgtgcccgccgatatgcatgaagggctcagcgaggagatcggcctcatcaaa
ctcgacgccagcttctcgcccgtgcgcaaagtcgcctatacggttgagcaggctcgcgtc
ggccagatgacgaactatgacaagctcattctcgaagtctggaccgacggttcagtctct
cccgaggatgcgattgcctacagcgcgaagatcatcaaggaccagatttccgtcttcatc
aacttcgatgagcggatttcgggcgaaaactcgaacgggtctgccgattccggcgaattc
aacgagcatctcttcaagagcatcgatgagctcgaactttccgttcgtgccactaactgc
ctgaagagcgccaatatcgccctcgtgggtgaactggtccagaagtccgagaacgagatg
ctgaagaccaagaacttcggtcgcaagtcgctagacgaaatccgtcgggtgcttggtgac
atggggctcgacttcggcaccaaggtcgacggcttcgagaagaaatatcaggaatggaag
aggaagcagcaacatgaggcatag
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