Nitratidesulfovibrio vulgaris RCH1: Deval_1332
Help
Entry
Deval_1332 CDS
T02064
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deval_1332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvg03019
]
Deval_1332
Enzymes [BR:
dvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Deval_1332
Messenger RNA biogenesis [BR:
dvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Deval_1332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADP86488
LinkDB
All DBs
Position
1522951..1524339
Genome browser
AA seq
462 aa
AA seq
DB search
MTFADLSLSPRLLAALDGMGYRQPTPVQRGAIPPALAGEDVLALAATGTGKTAAFVLPML
QRLMDGPRGAVRALVVAPTRELAEQTHDHVRRLGSMSRLRSTTIYGGVGVVAQALRLRAG
VEVVVGCPGRLLDHIRRGNLDLSSLEVLVLDEGDSLFDLGFLADVRMLLGMVPATCQRML
FSATMPDAVRVLAAEALRQPVTVQVDAVQPASTVHHALYPVPAHLRTPLLKTFLRSGPEG
SVVVFVRTRHGARRLWQQLDNVGFSVTCLQGKLSQRRRLAALEGFRDGRYDVLVATDVAA
RGLDISQVTHVVNYDVPSTADAYIHRVGRTGRAARNGTAMTFVTPADEAQVRNIERVLGT
VIPRERLADFDYGAPVRGPEGARPAMPPRQPRLPAGKRPAAPQEAQEQPRRGRPRPPRHA
VPPAAHPPTIPSRLPRQTPAGAEQVDLVRSSRMRGQGGDSDE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcgcagacctctccctctctccccggttgctcgccgcgctcgacggcatgggc
tatcgccagcccacacccgtccagcgtggggccatcccgcccgccttggcgggagaggat
gtactggcccttgccgcgacgggaacgggcaagacggcggcattcgtgctgcccatgctg
cagcggctcatggatggtccgagaggggcggtgcgcgccctcgtcgtggcccctacgcgt
gagcttgcggaacagacccatgaccatgtgcggcgtctcggttcgatgtcgcgcctgcgt
agcacgaccatctacggaggcgtgggcgtcgtggcgcaggccttgcggctgcgggccggg
gtcgaggtggtggtggggtgccccggcaggcttctcgatcatatccggcgtggcaacctt
gatctttcgtcccttgaggtcctggtgcttgacgagggcgattccctcttcgacctcggt
tttctggcggatgtgaggatgctgcttggcatggtgcccgcgacctgccagcggatgctc
ttttccgcgaccatgcccgacgccgtgcgcgtccttgccgccgaggcgctacgtcagcct
gtgacggtgcaggtggacgccgtgcaacccgcatccaccgtgcatcatgccctgtacccc
gtgccagcccatttgcggacgcccctgctcaagacgtttttgcgaagcgggcccgagggg
tctgtcgttgtcttcgtgcgtacccgccacggggcacgcagactctggcagcaactcgac
aacgtggggttcagcgtcacctgccttcaggggaagttgtcgcaacgacggcgacttgcc
gcgctcgagggcttccgcgacgggcgctacgacgtgctggtggccaccgatgtggcggca
cgcgggctggacatctcgcaggtgacgcatgtggtgaactacgatgtgccgtcgacggcc
gacgcctatatccacagggtggggcgcacagggcgtgctgcccgcaatggaacggccatg
acctttgtcaccccggcggatgaggcgcaggtgcggaacatcgaacgggtactgggcacc
gtcatcccgcgcgagaggcttgccgatttcgattatggcgcgcctgtgcgcgggccggag
ggggcgcgtccggccatgcctccccgccagccgcgactgccagcaggcaaacgtccggct
gcaccgcaagaggcgcaggaacagccgcgccgcgggcgtccgcgtccgccccgtcatgcc
gtgcccccggcggcacaccccccgacgattccctcgcgtctcccacgacagacgcctgcg
ggtgcggaacaggtcgacctcgtcagaagttcccggatgcgggggcagggcggtgattca
gacgaatag
DBGET
integrated database retrieval system
