Nitratidesulfovibrio vulgaris RCH1: Deval_1338
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Entry
Deval_1338 CDS
T02064
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deval_1338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvg03019
]
Deval_1338
03110 Chaperones and folding catalysts [BR:
dvg03110
]
Deval_1338
03029 Mitochondrial biogenesis [BR:
dvg03029
]
Deval_1338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvg04147
]
Deval_1338
Enzymes [BR:
dvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Deval_1338
Messenger RNA biogenesis [BR:
dvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Deval_1338
Chaperones and folding catalysts [BR:
dvg03110
]
Heat shock proteins
HSP60 / Chaperonin
Deval_1338
Mitochondrial biogenesis [BR:
dvg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Deval_1338
Exosome [BR:
dvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Deval_1338
Exosomal proteins of other body fluids (saliva and urine)
Deval_1338
Exosomal proteins of breast cancer cells
Deval_1338
Exosomal proteins of colorectal cancer cells
Deval_1338
Exosomal proteins of bladder cancer cells
Deval_1338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADP86494
LinkDB
All DBs
Position
1530617..1532260
Genome browser
AA seq
547 aa
AA seq
DB search
MASKEILFDTKAREKLSRGVDKLANAVKVTLGPKGRNVVIEKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIYREGVKLVAAGRNPMAIKRGV
DKAVESLVRELGNLAKPTRDQKEIAQVGTISANSDSTIGNIIAEAMSKVGKEGVITVEEA
KGLETTLEVVEGMQFDRGYLSPYFVTDPEKMVCELDEPFILCNEKKISTMKDMLPVLEQV
AKMQRPLVIIAEDVDGEALATLVVNKLRGALQVVAIKAPGFGERRKAMLQDIAVLTGGQV
VSEDMGIKLENISVADLGTAKRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDY
DREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALV
RVAKVLDDIKPADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDGFGFNA
ATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGM
GGMGGMY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaggaaatcctttttgataccaaggctcgtgaaaagctttcccgtggcgtc
gacaaacttgccaacgccgtaaaggtcaccctcggccccaagggtcgtaacgttgtcatc
gagaagtcgttcggttcccctgtcatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactcgaagacaagttcgagaacatgggtgcccagatggtcaaggaagtcgcttccaag
accagcgacatcgccggtgacggcaccaccaccgccaccatcctcgcccaggccatctac
cgcgaaggcgtgaagcttgtggctgccggccgcaaccccatggccatcaagcgtggcgtg
gacaaggccgtcgaatccctggtgcgtgaactcggcaaccttgccaagcccacccgcgac
cagaaggaaatcgcccaggtcggtaccatctctgccaactccgactccaccatcggcaac
atcattgccgaggccatgagcaaggtgggcaaggaaggcgtcatcaccgtcgaagaggcc
aagggccttgagaccaccctcgaagtcgtcgaggggatgcagttcgaccgcggttacctc
tccccctatttcgtgaccgaccccgagaagatggtctgcgaactggatgagcccttcatt
ctctgcaacgagaagaagatctccaccatgaaggacatgctgcccgttctcgagcaggtg
gccaagatgcagcgtcctctcgtcatcatcgctgaagacgtcgacggcgaagcccttgcc
accctcgtggtgaacaagctgcgtggcgcccttcaggtcgtcgccatcaaggctcccggc
ttcggcgagcgccgcaaggccatgctgcaggatatcgctgtcctcaccggtggccaggtc
gtctccgaagacatgggcatcaagctcgagaacatctccgtggccgatctcggcaccgcc
aagcgcgttgtcatcgacaaggagaacaccaccatcgtcgacggcgctggcaagggtgac
gacatcaaggcccgtgtgaagcagattcgcgcccagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggagcgtcttgccaagctcgtgggcggcgttgccgtcatccac
gtcggtgctgccaccgagaccgagatgaaggagaagaaggaccgcgtcgaggacgccctc
aacgcgacccgcgcagccgtcgaagaaggcatcgtccccggtggcggtaccgcgctcgtg
cgcgtcgccaaggttctcgacgacatcaagcccgctgacgacgacgagaccgctggcgtg
aacatcatccgccgcgccatcgaagaaccgctgcgccagatcgcttccaacgccggtttc
gaaggctcgatcgtggtcgaaagagtgcgtgaaggcaaggacggcttcggcttcaacgct
gccaccggcgaatacgaagacctcatcggcgtcggcgtcatcgacccgaagaaggtgacc
cgcatcgccctgcagaacgcagcttcggtcgcttcgctgctgctcaccaccgagtgcgcc
atcgccgagaagcccgaacccaagaaggatatgcccatgcccggcggcatgggtggcatg
ggcggcatgggcggcatgtactag
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