Nitratidesulfovibrio vulgaris RCH1: Deval_1623
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Entry
Deval_1623 CDS
T02064
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvg03009
]
Deval_1623
Enzymes [BR:
dvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Deval_1623
Ribosome biogenesis [BR:
dvg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Deval_1623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Tox-URI2
Motif
Other DBs
NCBI-ProteinID:
ADP86776
LinkDB
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Position
1833234..1834112
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AA seq
292 aa
AA seq
DB search
MKHDSPRQGDSRSTRQHTSPRKRAAVPHVPAPQAGTSPDEVEDGGTRLNKALSGAGVCSR
RQADTLIAGGKVRVNGEVVTEMGRRVFPATDRIEVEGRLLACGEALNRHRHTYVMLNKPV
QVVSTVRDPQGRTTILDILPDDLKTVRLYPVGRLDFFSEGLLLLTDDGDLTHRLTHPKWH
LPKYYRVLVREDIPPAALTAMRSGMTLAEGDRVAPVEAYIIDRSEYGVELEMVLHQGINR
QIRRMCRDLGLTVLRLLRIQQGPVELGNLSRGACRRLEDHEVKALRKAAGLS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcatgattccccccgtcaaggtgattcccggagcacccgacagcacacgtctccc
cgcaagcgggctgccgtgccccacgtccctgccccgcaagcgggcacttcccccgacgaa
gtggaggatggcgggacgaggcttaacaaggccctctccggggctggtgtctgctcgcgc
aggcaggctgacaccctcatcgcgggcgggaaagtgcgcgtgaacggcgaggtggtcacg
gagatgggccgccgtgttttccccgccacagaccgtatcgaggtcgaaggacgtctgctg
gcttgcggcgaagcgctgaaccggcatcgccatacctatgtgatgctcaacaagcccgtt
caggtcgtctccaccgtgcgcgacccgcaggggcggacaaccatcctcgacatcctcccc
gacgacctgaagaccgtacgactctatcctgtggggcggctcgacttcttctcggaaggg
ttgcttctgctcacggacgacggagacctcacgcatcgcctgacccatcccaaatggcat
cttcccaaatattacagggtgctggttcgtgaagacatcccacccgcagcgttgaccgcc
atgcgttccgggatgactcttgccgagggcgaccgcgtggcgcctgtagaggcatacatc
atcgaccggtcggagtatggggtggaacttgaaatggtgctccatcagggaatcaaccgg
cagattcgccgcatgtgccgcgacctcgggcttaccgtgcttcgccttttgcgcatccag
caaggtcccgtagaactcggcaacctgtctcgtggtgcgtgtcgccgactggaagaccat
gaggtgaaggcgcttcgcaaggccgccggactctcctga
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