Nitratidesulfovibrio vulgaris RCH1: Deval_1664
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Entry
Deval_1664 CDS
T02064
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg02020
Two-component system
dvg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Deval_1664
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Deval_1664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvg03021
]
Deval_1664
Transcription machinery [BR:
dvg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Deval_1664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADP86815
LinkDB
All DBs
Position
complement(1869335..1870765)
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AA seq
476 aa
AA seq
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MALELRQQLKLSQQLVMTPQLQQAIRLLQLSRLELVETVQQELLENPFLEEGMDEGAASS
ASEASSRKDESAPEAYDRELSRNADWEDYLGEFASSSRQAQVRETELPEEMTAFEARYSA
RPSLEGHLMWQLRLSRLTEDQKGIGETIIGNIGSSGYLQASVEDIAEMCGADASEVIPVL
HAVQRFDPVGVASRTPQECLLIQIEMLGYDRDRVLVELVRDHLEDLETRRYKPLLRKFKL
DMDDLKEYLDIIQSLDPMPGSSFGGSDPMFVSPDVFVYKYDDEFVIVLNDDGLPHLQLSS
LYDQSLAGVTGKDKDFVQEKVRSASWLIKSLYQRQRTLYKVVESIIKYQRGFFEDGVTRL
RPLILKDIADDISMHESTVSRITTNKFVATPHGVFELKFFFNSALELDDGSQVGSESVKA
LIKKLIGEENPKEPLSDERIGEILKEQLQVNIARRTVAKYRTAMNIPSSSKRKEVF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgaacttagacagcaactcaagctgagtcagcagcttgtcatgacgccacaa
ctgcagcaggccatacgccttttgcaattgtcacgtcttgagcttgtcgagaccgttcag
caagagcttcttgagaatccgttccttgaagaaggaatggatgaaggcgctgcatcttct
gcctcagaagcctcctcgcgtaaagacgaatctgcgccggaggcgtatgacagggaattg
tcgcgtaatgccgactgggaagactatcttggcgaattcgccagctcttcgcggcaggcg
caggtacgcgaaactgaactccccgaggagatgaccgcgttcgaggcgcgctattctgcc
cgcccatcgcttgaagggcatctcatgtggcagttgcgtctttcgcgtcttacagaagac
cagaagggcatcggtgaaaccatcatcggcaatatcggctcttcgggatatcttcaggcc
tctgtcgaagacattgcagagatgtgtggtgccgatgcttccgaagtcattccggtattg
cacgccgtccagcgtttcgacccggtaggtgttgcctcgcggactccgcaggaatgtctg
ctgattcagatcgaaatgcttggctacgaccgcgaccgtgttctcgtcgaactcgttcgc
gaccacctcgaagaccttgaaacccgccgttacaagccgctgctgcgcaagttcaaactc
gacatggatgatctcaaggaataccttgatatcatacagtctctcgaccccatgccaggt
tcgagcttcgggggcagcgaccccatgttcgtaagccccgacgtgttcgtgtacaaatac
gacgatgaattcgtcatcgtgcttaacgacgacgggctgccccatctgcaactcagttcg
ctgtacgaccagagtcttgccggtgtgacgggcaaggacaaggacttcgtgcaagagaag
gtgcgttccgcgtcgtggctcatcaagagcctctatcaacggcaacgcaccctgtacaag
gtcgttgaaagtattatcaagtaccagagggggttcttcgaggatggcgtgacccgttta
cggccactcatcctcaaggacatcgccgacgacatcagtatgcacgagtcgaccgtgagt
cgcatcacgacgaacaagttcgtcgccacgcctcacggtgtgttcgagctcaagttcttc
ttcaacagtgcgctcgaacttgatgatggcagccaggtcggttcagagagtgtcaaggct
ctgatcaagaaactcatcggcgaggagaatcccaaggaacctctgagcgatgagcgaatc
ggcgagatactgaaggaacagcttcaggttaatattgcccggcgtacggttgcgaagtat
cgtacagccatgaatatcccctcttcgtccaagcgtaaggaagttttctga
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