Nitratidesulfovibrio vulgaris RCH1: Deval_1990
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Entry
Deval_1990 CDS
T02064
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvg03019
]
Deval_1990
Messenger RNA biogenesis [BR:
dvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Deval_1990
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ADP87138
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All DBs
Position
complement(2241887..2242924)
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AA seq
345 aa
AA seq
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MEKRQSIKDIEANGDVRGLFLLGAATLNQARNGPFWRLELRDATGTMEAKIWSPQSQAYP
DLAPGQIVDLEGRSGTYRDRVEVTVERLRTLGEAEQASLDISQFLPASERPAAEMLEELE
RLCREVFTHAPWRKFVLGVLRDDDVRPRLLVAPAAKAVHHAFVGGLVEHILSVTRLCLHL
AEHYPELDRQALVAGAIFHDIGKVWELTGGLANDYSDEGRLLGHIHIGLERIEPHLRKSG
LEPELVMHFKHLILSHHGELEYGSPKRPKTAEAMVLHYADNIDAKMAQMRGLFANMGEGE
TGWSPYQNTLQRFLYRPARTPEPVATTRRRRGTPEVEQCSLLSKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaagacaatccatcaaagatatagaagccaacggtgatgtccgcgggctcttc
ctgcttggggcggcgacgctcaatcaggcccgcaacggccctttctggcgtcttgaactg
cgcgatgccacgggcaccatggaggccaagatatggagcccgcagagtcaggcctacccc
gaccttgcgccggggcagattgtcgacctcgaagggcgttcaggcacctaccgcgacagg
gtggaggtgaccgtggaaagactgcgtacactgggtgaggctgaacaggcctcgctggac
atctcgcagttcctgcctgccagcgagcgccccgccgccgagatgctcgaagagcttgaa
aggctgtgccgcgaagtgttcacccatgccccgtggcgcaagttcgtgctgggtgtgctg
cgtgacgatgacgtccgcccccgcctgctggtggccccggctgccaaggcggtgcaccat
gccttcgtgggtggtctcgtggagcatatcctctccgtcacccggctgtgcctgcatctg
gcagagcactatcccgaactcgacaggcaggcgcttgtggcgggtgccatcttccacgac
atcggcaaggtgtgggaactgaccggtggcctcgccaacgactactccgacgaggggcgt
ctgctggggcacatccacatcgggcttgagcgcatcgaaccgcacctgcgcaagtcgggt
ctcgaacccgaactggtcatgcatttcaagcacctcatactcagccatcatggtgaactg
gagtacggttcgccgaagcgccccaagacggcggaagccatggtgctgcactacgccgac
aacatcgatgccaagatggcccagatgcgcggactcttcgccaacatgggcgagggcgag
acgggctggtcgccgtatcagaacacgttgcagcgttttctctatcgtccggcacgtacg
ccggaacccgtggcgacgacccgtcgccgccggggcacacccgaggtggaacagtgttca
ttactttcgaaggcatag
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