Nitratidesulfovibrio vulgaris RCH1: Deval_2248
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Entry
Deval_2248 CDS
T02064
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_3
PAS_4
GAF_2
PAS_8
PAS_9
GAF
GAF_3
SBP_bac_3
PAS_7
SOTI
Motif
Other DBs
NCBI-ProteinID:
ADP87392
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All DBs
Position
2537308..2541549
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AA seq
1413 aa
AA seq
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MSRYIRALLCCVVIALIVAGASPIRASDVGSLPLRLALRPDMPPYQFFDMEGRPQGLVVT
VWESWTRATGTPVIFVPVTENEIPDAFARSRIDAVAALPAQLLPRFGLAEAAEVGHLSVG
IFSHTGNSSPDPADQGQGSVTSPAIPAGMGLATILQDTLPGVNPVVFPDTTSLLAAAHAG
NVRQIALYMAHGDYLRKHGRLEGFDAGIAVASSRLVAALPAADIARKQRIRLGFSRLADT
DHRDLEAMWHGAQTAFPFMRPLVLLGVLTFLLLVVVLGRNLALRRRMEKERAERRRTENM
LDGFLERLPDNHFTLDVDGTGAVVMASNGTEDVLGVSPDEAPSRLRHLLPPTKDGAWSQA
SFSIEAAHADGSLRTLDCLATTPDERGHRRVLVFDTTRRNLERQRVEAIHHRYMSILDNA
PVGIFRIMPDGSMVGANREMARLWGFSSPEELLASEEARRLILCDDPKACPLSFARIAAS
GGLVNEEVLCRTRDGRSFTGLVSARAVPQDDDVQSYVDGFLLDISQLKEARDKLRQTSRN
LADIIDFYPDATLVVDAAGRLVAWNRAMEELTGIAAADMIGKGDYEYALPFYGERIPILC
DLLRDPAIIPAARYSLLEQTEHRIVVELPLPFFRKGRGLFVWTAASALTDEHGKVTAVIQ
VIRDVTERRIELEALAKSRERYQMAIEATNEGIWEWDVTTGELYHSPRCVEILGRGGASA
PDTLLRDLSLQVHPDDRLRMVTLTQSLMTEPVERFSLECRMRHPVQGWRWVLCHGVVQRN
GSGGPRRITGSIADITERKQSEIISAILLQISNAVNVTHDIEGLFSTIHDILRSYVAAEN
FFIALVDEKQDRLEFPYHTDEKDPSLPRLESISSLASPPPTLEVIRTGRQLLLSYEDLLG
RAYIGTIASVWLGTPLRVRGKVIGAMVLQHYSDPDAFSDSDARLMTSLADQIAVAIERKQ
NEEQLTYLALHDSLTGLPNRTLLLERIEQARLRSLRGKGRSFAVMMIDLDRFKIINDSHG
HAVGDRLLQMVSAAVRPVLRPADTVARLGGDEFAILLEDVATPREVVHVARRVIKAVERP
ARVANKLLRTSASVGIVLRTDGYGSADELLRDADIAMYQAKEQGRGRFRVFNRTMHQQAM
DAMNLENDLGAALRWGQFELDYQPVFDTRSRALLGFEALVRWRHPLRGLIPPTAFIPVAE
ETGIITRLGHWVLETALTALARWRLQIPGIDDLYVAVNMSALQFAQPTLPGSVRDALQKT
GLPASCLKVEITETAIMQDPTTALQRISALRDLGVGIGIDDFGTGYSSLAYLQRFPVDTL
KVDRSFVSQSTTPEGEGNREIVRAVVVLAHSLSLAVVAEGVETEEQFAFLAGLGCDAVQG
YLLSRPVPEADIPAHISTTWALPAQGDAIPESP
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgttacatccgcgccttgctgtgctgtgtggtcattgcgctcatcgtagcgggc
gcatcacctatccgggcttccgatgtagggtctttgccactgcgcctcgccctgcggccc
gacatgcctccataccagttcttcgatatggaaggacgcccacaggggctggtcgtcacc
gtatgggaaagctggacgcgtgccacgggcactcccgtgatttttgtgcctgtcacggag
aacgagattcccgacgccttcgcccggtcgcgcatcgacgccgtcgccgccctgcccgcc
cagttgctgcctcgtttcggtctcgccgaagcggcagaggtgggccatctttccgtaggc
atcttctcgcataccgggaactcttcgcctgaccctgccgaccaggggcaggggagtgtc
acatcacccgccatcccggccgggatgggactcgccaccatcctgcaggatacgctgccg
ggagtgaatcccgtcgtctttcccgacaccaccagtctgcttgccgccgcccatgccgga
aacgtacggcagattgccctttacatggcccatggtgactacctgcgcaaacacggacgc
ctcgaaggtttcgatgcgggcatcgccgtagcctcaagtcggctagtggcggccctcccc
gctgccgacatcgcacgcaagcaacgcattcgactcggtttctcccgtctggcggatacc
gaccaccgcgaccttgaggccatgtggcacggtgcgcagacggcctttccgttcatgcgg
cccctcgtgcttcttggcgtactgacattcctgcttctggtcgtcgtactcggccgcaac
ctcgcgctgcgcagacgcatggagaaggaacgtgccgaacgccgccgcaccgagaacatg
ctcgacggctttcttgaacgcctgccagacaaccacttcaccctcgatgtggatggaacc
ggcgctgtcgtcatggcaagcaacggcacggaggacgttcttggcgtctcgccggatgag
gcaccatccagactccggcacctgcttcccccgacgaaggacggcgcgtggtcgcaggcg
tcgttctcgattgaagcggcacacgctgacggttcactgcgcacgctggactgccttgcc
accacgcccgacgaaaggggacaccgccgtgtcctcgtgttcgacaccacccgccgcaac
ctcgaaagacaacgtgtcgaggccatacatcaccgctacatgtccatcctcgacaatgcg
ccggtgggcatcttccgcatcatgcccgacggttccatggtgggtgccaatcgcgagatg
gcaaggctatgggggttctcgtcgcccgaagaactgctcgcgtcggaggaggcacgccgc
ctcatcctctgcgacgaccccaaggcctgtcccctgagttttgcccgcatcgccgcatcc
ggcgggctggtgaacgaggaggtgctgtgccgcacccgcgacggacgcagcttcaccggg
ctcgtctcggcacgggcagtaccgcaggacgacgatgtacagtcatacgtcgacggcttc
ctgctcgacatctcgcaactcaaagaggcacgggacaagctacgccagacaagccgcaac
ctggccgacatcatcgacttctaccccgatgccacgctcgtggtcgatgccgcaggaagg
ctggtggcatggaacagggccatggaagaactcacgggcatcgccgcggccgacatgata
ggcaagggcgactacgaatatgccctgccgttctacggtgagcgcatccccattctgtgc
gacctgctgcgcgacccggccatcatcccggccgcgcggtacagtcttcttgagcagact
gaacaccgcatcgtggtggaactgcctctcccgttcttccgcaaggggcgcgggctgttc
gtgtggacggcggcatcggccctcacggacgaacacggcaaggtcaccgcagtcatacag
gtcatccgtgacgtgaccgaacgcaggattgaactggaagcgctcgccaaaagccgcgag
cgctaccagatggccatcgaagccaccaacgagggaatctgggaatgggacgtcaccacc
ggcgaactctaccattcaccccgttgtgtcgagatactgggccgtgggggcgcaagcgca
cctgacacccttctccgcgacctctccctgcaggttcatccggatgacaggctgaggatg
gtgacgctgacgcaatcgctcatgacggaacccgtcgaacgcttctcgctggaatgccgg
atgcgccatcccgtacagggttggcggtgggtactctgccacggcgtcgtccagcgcaac
ggttcaggcgggccaagacgcatcaccgggtccatcgcggacatcaccgagcgcaaacag
agtgagatcatcagtgccatcctgctccagatatccaacgcggtgaatgtcacccacgac
atcgaggggctgttcagcaccatccatgacatcctgcgcagctatgtcgccgccgagaac
ttcttcatcgccctcgtcgacgagaagcaggaccggctcgaattcccctaccataccgac
gagaaggacccttccctgccgcggctggagagcatctcgagccttgcctcgccgcccccg
acccttgaggtcatccgcaccgggcgccaactgctgctctcgtacgaagacctgctaggc
cgcgcctacatcggcaccatcgcctcggtctggctggggacccccctcagggtgcgcggc
aaggtcatcggtgccatggtgctgcagcactactccgaccccgatgccttctccgacagc
gacgcacgcctcatgacttcgctcgccgaccagattgccgtggccatcgagcgcaagcag
aacgaagagcaactcacctacctcgccctgcacgacagcctcacggggctgcccaaccgt
acgctgcttctcgaacgcatcgaacaggcgcggctacgctcgttgcgcggcaaggggcgc
tcgttcgccgtcatgatgatcgacctcgacaggttcaagatcatcaacgacagccacggg
cacgccgtgggcgacaggctgctccagatggtctctgcggcggtgcgccccgtgctgcgc
cctgcggacacggtggcccgcctcggtggtgacgaattcgccatcctgctggaggatgtc
gccaccccgcgcgaagtggtgcatgtcgcccgccgggtcatcaaggccgtcgaacgacct
gcgcgcgtcgccaacaagctgctgcgaacctcggccagcgtcggcatcgtgctgcgcacc
gatggctacggttccgccgacgaactgctccgcgacgcggacatcgccatgtatcaggcc
aaggaacaggggcgcggacggttcagggtgttcaaccgcaccatgcaccagcaggccatg
gacgccatgaacctcgagaacgacctcggggcggcactccgctggggacagttcgaactg
gactaccagccggtgttcgacacgcgctcgcgcgcgctgctcggatttgaagcccttgtg
cgctggcgtcaccccctcaggggactcattccgcccacggcgttcatccccgtggctgaa
gagacgggcatcatcacacgcctcggccactgggtgctcgaaaccgcgctgacggcactg
gcgcgctggcgcctgcagattcccggcatcgacgacctctacgtggccgtgaacatgtcc
gccctgcagttcgcgcaacccacgctgccgggaagcgtgcgcgacgcattgcaaaagacg
gggctacccgcctcgtgcctcaaggtggaaataaccgaaacggccatcatgcaagacccc
acaacggccctgcaacgcatctcggccctgcgcgacctcggggtaggcatcggcatcgac
gacttcggcaccggctattcatcgctggcctatctgcagcggttcccggtcgacaccctc
aaggtcgacaggtcgttcgtctcgcagtccaccacacccgaaggcgaaggcaaccgtgaa
atcgttcgggccgtcgtcgtgcttgcccacagcctctcactggcggtcgtggcggagggg
gtggagaccgaagaacagttcgccttcctcgccggactgggatgtgatgccgtgcagggc
tacctgctgtcacgcccggtacccgaggccgacattccggcccacatctccaccacatgg
gcactgcccgcgcagggcgacgccatccctgaatcgccgtag
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