Nitratidesulfovibrio vulgaris RCH1: Deval_2882
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Entry
Deval_2882 CDS
T02064
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg00061
Fatty acid biosynthesis
dvg00071
Fatty acid degradation
dvg01100
Metabolic pathways
dvg01212
Fatty acid metabolism
dvg02024
Quorum sensing
Module
dvg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Deval_2882
00071 Fatty acid degradation
Deval_2882
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Deval_2882
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dvg01004
]
Deval_2882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvg04147
]
Deval_2882
Enzymes [BR:
dvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Deval_2882
Lipid biosynthesis proteins [BR:
dvg01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Deval_2882
Exosome [BR:
dvg04147
]
Exosomal proteins
Exosomal proteins of breast milk
Deval_2882
Exosomal proteins of breast cancer cells
Deval_2882
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
PhdYeFM_antitox
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADP88024
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All DBs
Position
3270771..3272465
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AA seq
564 aa
AA seq
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MEELSLYTLRHVLERSAVLYADQPSLSQLGCEPLTFRDLHDHAEHLALWLRDNGVGTGDR
VALLAENSPNWGIAYFAITGMGAIAVPILPEFHADAVQHILRHSEAKAVFVSERLFPKLE
EGEGIADSLMCISMETFQSIAQGTTRDMLRELKSKGLREFRKLRDKAKRLANMADAAPAE
DDVAAIIYTSGTTGHSKGVVLTHRNIVWDADAVKSIVKLGPGDRMLSILPLSHTYECTLG
LVLPVLNGAHVHYMDKPPTARALLPAMAQVRPTAMLSVPLVIEKIFKTALLPKLTGSWLK
QRLYAIPFVRRKLHALAGRKLLESFGGALRIFCIGGAGIAPDVERFLREANFPYAIGYGL
TETAPLVAGSGPASTRLTSTGFTLDGVDIAIDAPDPATGEGEIIVRGPNVMREYYKAPQI
TASAFTPEGWFRTGDLGKFDADGYLYIKGRLKNVIIGPSGENIYPEEVEAIIHQSPFVLE
SLVFQQDGRLVARIHLDAARLDESFGDLPALKQREKIDALLETLRNEVNTKVSTFARLAK
VIEQTEPFEKTPTHKIKRYLYVEQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttagcctctacacgttgcggcatgtgctcgaacgcagtgccgtcctgtat
gccgaccagccctcgctctcacagcttggctgcgaaccgctgaccttccgcgacctgcac
gaccacgcagaacacctcgccctgtggctgcgtgacaacggcgtcggcactggcgaccgg
gtggcgctccttgccgagaacagccccaactggggcatcgcctacttcgccatcaccggc
atgggtgcgattgccgtgcccatccttcccgaattccacgccgacgcggtgcagcacatc
ctgcgccactctgaagccaaggcggtgttcgtatccgaacgcctcttccccaaactggaa
gagggtgagggcatcgccgacagcctcatgtgcatcagcatggagacgttccagtccatc
gcacagggaaccacgcgcgacatgcttcgcgaactcaagtcaaaaggtctgcgtgaattc
cgcaagctgcgcgacaaggcgaagcgactcgccaacatggccgacgcagcccctgcggag
gacgacgtcgcagccatcatctacacgtcaggcacgacgggccattccaagggggtcgta
ctgacccaccgcaacatcgtctgggacgccgatgccgtgaagagcatcgtgaaacttggc
cccggagacaggatgctctccatcctgcccctctcccacacgtacgaatgtacgctgggc
ctcgtgctgcccgtgctcaacggcgcgcacgtccactatatggacaagccgcccacggcg
cgtgcccttctccccgccatggcgcaggtgcgccccacggccatgctctccgtaccgctg
gtcatcgaaaagatcttcaagaccgcgctgttgcccaaactcaccgggtcgtggctcaaa
cagcgcctttacgccattcccttcgtgcgtcgcaaactgcatgcgcttgcggggcgcaag
ttgctcgaatcgttcggcggggcactgcgcatcttctgcatcggcggtgcgggtatcgcc
cccgatgtggaacgcttcctgcgcgaggcgaacttcccctatgccatcggttacgggctc
accgagacggccccccttgtggcgggttccggcccggcgtccacacgtcttacgtccacc
gggttcaccctcgacggtgtggacatcgccattgatgcgcccgaccccgccacgggggaa
ggagagatcatcgttcgcggccccaacgtcatgcgcgaatactacaaggcaccgcagata
acggcctcggccttcacccccgaaggctggttccgcacgggcgacctcggcaagttcgac
gccgatggctacctgtacatcaagggcaggctcaagaacgtcatcatcggccccagcggg
gagaacatctaccccgaagaggtcgaagccatcatccaccagtcgcctttcgtcctcgaa
tcgctggtcttccagcaggatggcagactggtggcacgcatccacctcgatgcagcccgg
ctggacgagtcctttggtgacctgcccgccctcaagcagcgcgaaaagatagacgccctg
ctcgagaccctccgcaacgaggtcaacaccaaggtgtcgacgttcgcccggcttgccaag
gtcatcgaacagaccgaacccttcgagaagacacccacgcacaagatcaaacgctacctg
tacgtggagcaatag
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