Nitratidesulfovibrio vulgaris RCH1: Deval_2960
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Entry
Deval_2960 CDS
T02064
Name
(GenBank) DNA polymerase III, delta prime subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03030
DNA replication
dvg03430
Mismatch repair
dvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deval_2960
03430 Mismatch repair
Deval_2960
03440 Homologous recombination
Deval_2960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvg03032
]
Deval_2960
03400 DNA repair and recombination proteins [BR:
dvg03400
]
Deval_2960
Enzymes [BR:
dvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deval_2960
DNA replication proteins [BR:
dvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deval_2960
DNA repair and recombination proteins [BR:
dvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deval_2960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Ago_N_2
Motif
Other DBs
NCBI-ProteinID:
ADP88102
LinkDB
All DBs
Position
complement(3369405..3370367)
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AA seq
320 aa
AA seq
DB search
MARDVDATLPGAGEGVKALSPALAARFDGVRARLEALAGSPPQVLLLEGATADERYAVAL
WWAARLNCREASSPCLACPACVQVTGGMHRDVFLFDGREGNISIDSVREVRSILGEPPRG
DGYRVIVFAEAQSLGEAAANALLKSLEEPRPGTSFLLLAPQRERLLPTLVSRGWVLTLPW
PRPMDAPAEAVTPWLDALAAFCGSGRGWFEKTGVRGAVDADLATAVVLACERALLAALSG
EADAGDGGHAPSPMATHPLTAFFSRLGPEGMAQVDALLAHCSESLALRPSPVTPPMVLDW
LAAHLFGLARSRRKSPAAAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacgtcgacgctacgcttcccggggccggggagggggtgaaagccctctcc
ccggcccttgccgcacgcttcgatggcgtgcgcgcccggctggaggcccttgccggttcg
cccccgcaagtgctgctgctcgaaggggcgacggccgacgagcgctatgccgtggccctg
tggtgggcagcccgtctcaattgccgcgaagcctcttccccctgcctcgcctgtcccgcc
tgtgtgcaggtgacgggcggaatgcaccgcgacgtctttctcttcgacgggcgcgagggc
aacatcagcatcgactcggtgcgcgaggtgcgttccatcctcggtgaaccaccccgtggc
gacgggtatcgcgtcatcgtcttcgccgaggcgcagtcgctgggcgaggccgctgccaac
gcattgctcaaatcgctggaggaaccgcgccccggcacgtcattcctcctgctggcccca
cagcgtgaacgccttctgcccaccctcgtctctcgcggctgggtgctgaccctgccgtgg
ccgcgtcccatggatgcgcctgccgaagccgtgaccccgtggctggatgcgctggccgcc
ttctgtggttcggggcggggctggttcgagaagacgggcgtacggggggccgtggacgcc
gaccttgccacggcggtggttcttgcctgtgaacgtgccctccttgccgccctgtccggc
gaggcggatgccggtgacggcgggcatgcgccctcgcccatggcgacgcatccgctgacg
gcgttcttcagccgtctggggccggagggcatggcgcaggtcgatgccctgctggcccac
tgtagcgaaagtctcgcattgcggccaagtcctgtgacccctcccatggttctcgactgg
ctggcggcgcacctcttcgggttggcacgttcgcgacgcaagtctccggcggctgcgcgc
tga
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