Nitratidesulfovibrio vulgaris RCH1: Deval_3196
Help
Entry
Deval_3196 CDS
T02064
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
dvg
Nitratidesulfovibrio vulgaris RCH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_2
AAA_5
AAA
MCM
Motif
Other DBs
NCBI-ProteinID:
ADP88337
LinkDB
All DBs
Position
pDEVAL01:complement(130669..132396)
Genome browser
AA seq
575 aa
AA seq
DB search
MDENDLLDNLIDLCDDLAWGRPASEDRLFGLTAPQASFQISGQTPCQTPGQASSKASGQT
SVQTSSQTPSQASAQTSGQGAQQPSPQSSPQTSPKPGAGTVPERYTRLAEAFGMMLVKVE
AREFQQAQLIAELRDRNEELEEARRLLTERNQRLAHTLQDSFQPRRLIGQCAAMRAVTDM
ALSIARRPINTLLLGPTGAGKEVVAKLIHYSSPRREGPFIAVNCTAIPEALFESEMFGIE
RGVATGVSARKGLVEEADGGTLFLDELADMPLPHQAKLLRVLEGREVVRVGSSRAIPVDI
KVVAATNADLAQAVREGRFREDLYYRINVAEVHLPPLCERGDDILLLAQHFLERHCAQMG
RPRLTISFGARDLLRRYAWPGNVRELNNEMERAAALTIGDRVEVGDLSPRIAGPVGAGGS
GGGAGGGTAAASAGRETASAGSAGHAPGLTAGAEGSGGAAGAGGAPCPAGSLPGAGSLPD
AGAFPGAGYQPPSVASPSPAFVAAVSAGAGQPGISGGADAADRFNLHGLERETILAALDH
AGGNKSRAAELLGITREGLRKKLLRFAISGGDDRA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaacgacttgctcgacaacctcatcgacctctgcgacgacctcgcatggggt
cgccccgccagtgaagacagactcttcggcctgaccgcacctcaggcgtcgtttcagatt
tcgggtcagacgccgtgccagacgccggggcaggcgtcatcaaaggcttcggggcagact
tcagtacagacgtcatcacagacgccatcgcaggcgtcagcgcagacttcgggccaaggg
gcgcagcagccgtcaccccagtcgtcaccccagacgtcacccaagccgggggcgggcacc
gtgcctgaacgctacacccgccttgccgaggccttcggcatgatgctggtcaaggtcgag
gcacgcgaattccagcaggcgcaactcatcgccgaattgcgcgaccgcaacgaagaactc
gaagaggcgcgccgcctgctgaccgaacgcaaccagcgtctcgcccataccctgcaagac
agcttccagccccggcgtctcatcgggcagtgcgccgccatgcgcgccgtgaccgacatg
gccctttccatcgcacggcggcccatcaacacgctccttctcggccccaccggggcaggc
aaggaggtggtggcgaagctcatccactatagttcgccacggcgcgaggggccgttcatc
gccgtcaactgcaccgccatccccgaagccctgttcgagagcgagatgttcggcatcgaa
cgcggggtcgccacgggcgtctcggcgcgcaagggtctcgtggaagaggccgacggcggc
acgctcttcctcgatgaactcgccgacatgcccctgccgcatcaggccaagctgctgcgc
gtcctcgaagggcgcgaggtggtgcgcgtgggcagcagccgcgccatacccgtcgacatc
aaggtcgtggcagccaccaacgcagacctcgcacaggcggtgcgcgaagggcgtttccgc
gaagacctctactaccgcatcaacgtggcagaggtgcacctgccgcccctgtgcgaacgc
ggcgacgacatcctgctgctggcacagcatttcctcgaacggcactgcgcccagatggga
cggccccggctgaccatctcgttcggcgcgcgcgacctgctccgccgctatgcgtggccc
ggcaacgtgcgtgaactgaacaacgagatggaacgtgccgctgcgctcaccatcggcgac
cgtgtggaggtgggcgacctgtcgccccgtatcgccgggcccgtcggggctggcgggtcg
ggaggcggtgcggggggcggaacagccgcagcgtcggcaggccgggagacggcatctgcc
gggtcggccggtcacgcgccgggactcacggctggcgcagagggttccggtggtgccgca
ggtgccggtggtgcgccgtgccctgcggggtcactccccggcgcgggttccctgccggat
gccggggcgttcccgggcgcagggtaccagccgccgtccgttgccagcccgtcgcctgct
tttgtcgccgccgtatccgcgggtgccggccagcccggaatctccggcggggccgatgcc
gccgaccgcttcaacctgcacggactcgaacgcgagaccatcctcgccgccctcgaccac
gcgggcggcaacaagagtcgcgccgccgaacttctgggcatcacccgcgaggggcttcgc
aagaagctgctgcgcttcgccatctccggcggggacgacagggcatga
DBGET
integrated database retrieval system
