KEGG   Nitratidesulfovibrio vulgaris RCH1: Deval_3211
Entry
Deval_3211        CDS       T02064                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
dvg  Nitratidesulfovibrio vulgaris RCH1
Pathway
dvg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dvg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Deval_3211
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dvg02044]
    Deval_3211
Secretion system [BR:dvg02044]
 Type III secretion system
  Type III secretion core apparatus
   Deval_3211
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: ADP88352
LinkDB
Position
pDEVAL01:143710..145800
AA seq 696 aa
MTGGLRPSDTPGTLGAPDIHDGAHRPVILHYPCPSGLKTGACTPAIHDGASTPGTRNSLR
PYLAAIFAVLLFMLCLHAPSRCEAAPAFPHTYSHYSEQEQLTALLADFGRTQGLATSFSP
GVTGTVSGRFEDVAPEKFLQGMKAAFGVSWYRLGPTLHFYHEAETTRIFISPRVMSAESL
YRMLRQSSVLSPQLPAELMPGGAMVVVSGPPAYLDQIQAAVTAFEEAQTGNFGMKVFPLK
YAWAEDITVNSMDKTVTLPGVASILRAMVSGSPSSATRVTQETATVDKLSGTGLISQGRQ
QKESGQSNQAQRGGQASQQDSGGAQDGQQVSIMADPRVNAVIVHDAVYRMPYYESVIGDL
DRPVELVEIHAAIVDIDTNFKRDLGVTYQATVGKDQRWAGGADVSTGTDKFTPLPVPGVP
QGSGLTLSTIYTMGSDYFLARINALEKNGEARMLGRPSVLTVDNVQATLENTSTYYIQVQ
GYQAVDLFKVEAGTVLRVTPHIINNDDGTDAIKLVVSVQDDQNNQTTPTSTSTTQAIPPI
KQTKINTQAIIGAGQSLLIGGYYYEQKATSADGVPILMNIPVLGNLFKTQSKENKRMERL
ILITPKVVRLDNLPGTPPRVDDPAFHRTATQSDYAERTPTPPPSRRSGCSRAPDNAPEAA
SGAAGGTGGTGVTANTEGGTTPQAATSPVPAYGVAP
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgacgggcggcttgcgcccgtctgatacgcccggtacgctcggcgcgcctgatattcac
gacggcgcgcaccgaccagtgattctgcactatccatgtccatcggggctgaaaacgggt
gcttgtacgcccgccattcacgatggcgctagtacgcccggcacgcggaacagcctgcgc
ccgtacctcgcggccatcttcgccgtgctgctgttcatgctgtgccttcacgcgccgtca
cggtgcgaggccgcacccgcctttccgcacacctattcgcactattcggaacaggagcaa
ctgaccgcgctgctggccgacttcgggcgcacgcagggccttgccacgtcgttctcgccc
ggtgtcacgggcacggtcagcggcaggttcgaggacgtggccccggagaagttccttcag
ggcatgaaggcggccttcggcgtgtcgtggtaccgcctcggccccacgctgcatttctac
catgaggccgagaccacgcgcatcttcatctcgccgcgggtcatgagtgccgagtcgctg
taccgcatgttgcgccagtcttcggtgctgtcgccgcaactgcccgccgaactcatgccc
ggcggcgccatggtggtcgtctccggcccgcccgcctacctcgaccagattcaggccgcg
gtgacggccttcgaagaggcccagacgggcaacttcggcatgaaggtgttcccgctcaag
tacgcgtgggccgaagacatcaccgtcaacagcatggacaagaccgtcaccctgcccggt
gtcgccagcatcctgcgggccatggtcagcgggtcgccctcgagcgccacgcgcgtcacg
caagagaccgccacggtggacaagctttccggcacgggcctcatctcgcaggggcgtcag
cagaaggagtcgggccagtcgaatcaggcgcagcgcggcgggcaggcctcgcagcaggat
tcgggcggggcgcaggacggtcagcaggtgagcatcatggccgacccgcgcgtcaacgcc
gtcatcgtgcacgacgccgtgtaccggatgccctactacgagtcggtcatcggcgacctc
gacaggccggtcgaactcgtggagatacacgccgccatcgtcgacatcgacaccaacttc
aagcgcgacctcggcgtcacctatcaggccacggtgggcaaggaccagcggtgggcgggc
ggtgccgacgtatccacgggcaccgacaagttcacccccctgcccgtacccggcgtgccg
cagggcagcggcctgaccctctccaccatctacaccatggggtcggactactttctcgcc
cgcatcaacgccctcgagaagaacggcgaggcccggatgctggggcggccctcggtgctg
accgtggacaacgtgcaggccaccctcgagaacaccagcacctattatatacaggtgcag
ggctatcaggccgtcgacctcttcaaggtcgaggcgggcacggtgctgcgcgtgacgccg
cacatcatcaacaacgacgacggcaccgacgccatcaagctggtggtgagcgtgcaggac
gaccagaacaaccagaccacgccgacctcgacctccaccacgcaggccatcccgcccatc
aagcagacgaagatcaacacgcaggccatcatcggcgcgggacagagtctgctgattggc
ggctactactacgaacagaaggccaccagcgccgacggcgtgcccatcctcatgaacatc
ccggtgctgggcaacctgttcaagacccagtcgaaagagaacaagaggatggaacgcctc
atcctcatcacccccaaggtggtgcgcctcgacaacctgccggggaccccgccacgggtc
gacgaccccgccttccaccgcacggccacccagtcggactatgccgaacgcacccccacg
ccgcccccgtcgcgccgtagcggttgcagccgcgcgcccgacaatgcgccggaagcggct
tcgggtgcggcaggtggcacgggaggaacaggggtgacagcgaacacagaaggcggcacc
acgccccaagcggccacatcccctgtccctgcgtacggagtcgccccatga

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