Drosophila virilis: 6622366
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Entry
6622366 CDS
T01066
Symbol
ais
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvi03009
]
6622366 (ais)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6622366 (ais)
Ribosome biogenesis [BR:
dvi03009
]
Eukaryotic type
90S particles
Helicases
6622366 (ais)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
HEM4
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
6622366
NCBI-ProteinID:
XP_002048409
UniProt:
B4LIG4
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All DBs
Position
3:24414768..24417114
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AA seq
605 aa
AA seq
DB search
MDTFDIFKQLTAGVRFTKKRAAPSSKPNTSNQVKEQPRQLPSASEAAEASESGDECTAKD
EFRLLTNVTGTAPTAPKQKKAKKQLSKEQAEQQQRAEQISALRKEHSITVLGKDVPAPIS
SFDELSTPHFKLLPRLQENLLSYGFAQPTPIQMQALPVLLNNRALMACAPTGSGKTLAFL
TPIINGLRSHKTTGLRALVLAPTRELAQQIYRECAELTRGTGLRTHFISKVSEARQQHGP
DCKQKYDILISTPNRVRFLLQQQPPLLDFKGIEWFVLDEADRLMEEGQNNFKEQLDEIYA
ACTHPQKRVAFFSATYTVPVAKWALRHLKNLVRVTIGVQNSATDTVQQELLFVGSESGKL
LAVREMVRQGLQPPVLVFVQSKDRAKQLFEELLYDGINVDVIHAERTQHQRDNCVRAFRE
GHIWVLICTELMGRGIDFKGVNLVINYDFPPSTISYIHRIGRTGRAGRPGRAITFFTQDD
TANLRSIAQIIKNSGGEVPEYMLQMKKVRKSEAKMRAKKPLEREDISTKIRPEPRPTPKN
FVKLQKIEKTEKVLKQQKHKKHNNLAKNGDSNALRKTKKLAKIKDQIESKVAAKGKAKKP
KKSVK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatacattcgacatatttaaacaattaacagctggcgtacgatttaccaagaaacgt
gcggctccgtcatccaagccaaacacttccaaccaggtaaaggagcaaccgcgacagcta
ccatcggcctctgaggctgccgaagcttctgagtcaggcgatgaatgcacagcaaaggac
gaatttcgtttgctcactaatgtcacgggcacagcgccaactgcacccaagcagaaaaaa
gctaaaaaacaattgtcaaaggagcaggcagagcaacagcaacgtgcggagcagataagt
gcgctgcgcaaggaacacagcataacagtgctgggcaaggatgtgccagcgcccataagt
agctttgacgagctgagcacgccgcatttcaagctgctgccgcgcctgcaagagaatctt
ttgtcctatggctttgcacagcccacacctatacaaatgcaggcgctgcccgtgctgctg
aataatagggcactgatggcctgcgccccaacgggttcgggtaaaacattggcttttctc
acccccatcattaacgggctgcgcagccataagacgactgggctgcgcgccctggtgctg
gcgcccacacgcgagctggcacagcaaatctatcgtgagtgcgcggagctgaccaggggg
acgggactacgcacgcacttcatcagcaaagtgagcgaagcgcggcagcaacatggaccc
gactgcaagcagaaatatgacatattaatatcaacgccaaaccgtgttcggttcctgctg
cagcagcagccgccactgctggacttcaaaggcattgagtggtttgtgttggacgaggcc
gatcgtctcatggaggagggtcagaacaatttcaaggagcaactcgacgaaatctatgcg
gcctgcacgcatccacaaaagcgtgtggcctttttcagtgccacctatacagtgcctgtg
gccaaatgggcgctgcggcatctcaaaaatctagtgcgtgtgacgattggtgtacagaac
agcgccacagatacagtacagcaggaactgctctttgtgggctccgaaagcggtaaactg
ctggccgtgcgtgaaatggtgcgccaaggactacagccgccagtgctagtctttgtgcag
agcaaggatcgcgccaagcagctgttcgaggagctgctctacgatggcatcaatgtggat
gtcatacacgcggagcgaacgcagcatcagcgcgataattgtgtgcgcgcttttcgcgag
ggtcacatctgggtgctcatatgcacagagctgatgggacgcggcattgacttcaagggc
gttaatctggtcataaactatgattttccgcctagcaccatttcgtatattcatcgcatt
ggacgcacaggtcgcgctggtcgtccgggacgcgccattaccttctttacccaggacgat
acggccaatttgcggagcattgcacagataatcaagaactccggcggagaggtgccggag
tacatgttgcaaatgaaaaaggttcgcaaatcggaggcgaaaatgcgtgccaagaagccg
ttggaacgcgaagacatatcaaccaaaatccgccctgagccaaggccaacgcccaaaaac
tttgttaaattacagaaaatagaaaaaaccgaaaaggttctcaaacagcaaaagcacaag
aagcataataatttggccaaaaatggagactcaaatgcgttgcgcaaaaccaaaaaactg
gccaaaatcaaagaccaaatagagagcaaagtggcggcaaaaggcaaagcgaaaaagccc
aagaagagtgttaaatga
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