Drosophila virilis: 6623164
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Entry
6623164 CDS
T01066
Symbol
Cpsf5
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
dvi
Drosophila virilis
Pathway
dvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6623164 (Cpsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6623164 (Cpsf5)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
6623164 (Cpsf5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
6623164
NCBI-ProteinID:
XP_002047260
UniProt:
B4LHP9
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All DBs
Position
3:12230482..12232982
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AA seq
203 aa
AA seq
DB search
MASSQVSNKSGSGWPRRGSQGQADASISNNGTQKYAPNQALTINRTINLYPLTNYTFGTK
EPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGE
LNAGEDEVEGLKRLLSETLGRQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKE
HKRLFLVQLHEKDTDRNASYDVP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgcaagtctcaaacaaatcgggctccggctggccgcggcgcggcagccaa
ggccaggctgacgccagtatcagcaataatggcacacaaaaatatgcgcccaatcaagca
ctgaccataaaccgcacaatcaatctctacccactaaccaactacacattcggcaccaag
gagccgctgtttgagaaggatccttcagtgccgtcacgctttcagcgtatgcgcgaggag
ttcgatcggatcggcatgcgtcgctctgtggagggcgtactgctcgtgcatgagcatgga
ttaccgcatgtgctgctgcttcaacttggcaccacattttttaagctgccaggcggagag
ctgaacgcgggcgaggatgaagtagaaggtctcaagcgtctactctctgagacgcttggc
cgtcaggatggcgttaaacaggattggattgtcgaggacaccattggcaattggtggcgc
ccgaatttcgaaccaccacaatatccatacattccaccgcacataaccaaaccaaaggag
cacaaacgcctgtttttggtgcaattgcatgaaaaggatacggacaggaacgccagttac
gatgtaccctga
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