Drosophila virilis: 6623519
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Entry
6623519 CDS
T01066
Symbol
HBS1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dvi
Drosophila virilis
Pathway
dvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6623519 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6623519 (HBS1)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6623519 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
6623519
NCBI-ProteinID:
XP_002046543
UniProt:
B4LDE7
LinkDB
All DBs
Position
3:5803039..5805355
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AA seq
670 aa
AA seq
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MSRHRIVRGMDYNDEYDGYDDVYGHSVDDDCVSPTDQQWLYDRARGQQSMSAFIKKNKNI
EEEAEDDDEDDDDEAYQKARRDSENFQMPELDDIAQAKLSSCVDEVRSVVGDAVSERRIV
ETSMRFDYDIQKILDDILNEETNKKEKEKRPQKLKLNATTPATKSSTTPKPTPTKITLSA
VKDARRGFDIASPKAPSSPNVSGRNTPVEGGDEAGRGSTTIFKVSKDQAQRNAQQLYEQE
RATQKSHIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVL
DETGEERARGITMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATR
GEFESGFELGGQTREHAILVRSLGVNQLGVVINKLDTVGWSKERFQEIVHKLKSFLKQAG
FKESDVSFTPCSGLTGENLTKAAQEPALKAWYEGPNLLEVIEHFKVPERAIDRPLRMSVS
DIYKGTGSGFCISGRIETGALCVNDKVLVGASREQAQVKSLSMDELTQTSVFAGDQVSVT
LAGIDVNNITVGCIICDPQMPIPVTTRFQCRIIVFNVKVPITMGYPVLLHHQSLIEPAVV
CKLTASIHKSTGEVVKKKPRCLGQNSCALVEVETSRPICIERYSDFKELGRIMLRVAGVT
IAAGMVTKIR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcacaggatagtacgcggaatggattacaacgacgaatacgatggctacgac
gatgtttatggccattccgttgatgatgattgcgtctcgcctacggatcagcaatggcta
tacgaccgggctcgcggtcaacagagtatgtcggcgtttataaagaaaaacaagaacatc
gaggaggaggcggaggatgatgatgaggacgatgatgacgaggcataccaaaaggctcgc
agagattcggagaatttccagatgccggaactggacgatattgcgcaggccaagctcagc
tcctgcgtggatgaggtgcgcagcgtggtgggcgatgcagtctccgagcgtcgcatcgtg
gagacatccatgcgtttcgactacgacatacaaaagattctcgacgatatactcaacgag
gagacgaacaaaaaggagaaggagaaacgtccacaaaagctgaaactaaacgcaacaacg
ccagcaacaaagtctagcacaacgcccaagccgacgcctactaaaataacgttgtccgcc
gtaaaggatgcacgacgtggcttcgacattgcctcgcccaaagcgccctcctcgccaaat
gtgtccggccgcaatacgcccgtcgaaggcggcgacgaagcgggacgcggctctacaaca
atattcaaagtgtccaaggatcaggcacaacgcaacgcccagcagctgtacgagcaggag
cgcgcgacgcaaaagagccacatacacatgattgtcattgggcacgtagatgccggcaag
agcacactaatgggccatctgctctacgacacgggcaacgtttcgcagcgggtgatgcac
aagcacgagcaggagtccaagaagctaggcaaacagagcttcatgtacgcctgggtgctg
gacgagactggcgaggagcgcgcccgtggcatcaccatggatgtgggccagtcgcgcatc
gagaccaaaaccaagatagtcacgctcctggatgcgcccggccacaaggacttcatacct
aacatgatatcgggcgcaacgcaagcggacgtggcgctgcttgtcgtggatgcgacgcgt
ggcgagtttgagtccggctttgagctgggcggacagacacgcgagcatgcgatactcgtg
cgctcgctgggcgtcaatcagctgggcgtggtcattaacaagctggacacggtgggctgg
tccaaggagcgctttcaggagattgtgcacaaacttaaatcgtttctaaaacaggctggt
ttcaaggaatcggatgtcagtttcacgccctgctcgggcctaacgggcgagaatctcacg
aaagccgcccaggagcccgccctgaaagcctggtatgagggaccaaatcttctggaagtc
atcgaacatttcaaggtacccgaacgtgccattgaccggccgctgcgcatgtccgtctcg
gacatatacaagggcaccggctcaggcttctgcatttcgggtcgcatcgagacgggtgcc
ctttgtgtcaacgacaaggtgctggtgggcgctagtcgggaacaggcgcaggtcaaatcg
ctcagcatggacgagctgacgcagacgagcgtatttgccggcgaccaggtctctgtgaca
ctggccggcatcgatgtcaacaacataacggtgggctgcatcatatgtgatccccagatg
ccaatcccagtgacaacacgcttccagtgtcggatcattgtcttcaatgtaaaggtgccc
attacgatgggctatccggtgctgctgcatcatcagtcgctcatcgagccggccgttgtc
tgtaagctgaccgcatctatacacaaaagcaccggcgaagtggtcaagaagaagccgcgt
tgtctgggccaaaactcgtgcgccctggtcgaggtggagacctcgcgtccgatttgcatt
gaacgctactcggatttcaaggagctgggacgcattatgctgcgtgtggcaggcgttacg
attgccgccggcatggtcactaaaatccgctaa
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