Drosophila virilis: 6623535
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Entry
6623535 CDS
T01066
Symbol
TrpA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dvi04040
]
6623535 (TrpA1)
Ion channels [BR:
dvi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
6623535 (TrpA1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
MARVEL
Motif
Other DBs
NCBI-GeneID:
6623535
NCBI-ProteinID:
XP_002046790
UniProt:
B4LEP7
LinkDB
All DBs
Position
3:complement(8461779..8474679)
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AA seq
1277 aa
AA seq
DB search
MIVFKAAEKKLTLERFSLEVSRDLRPFTITTAGTDPDQASIEVKMPKLWNGVYNAQCAAL
PSPDLMEAQPKILPKTRSNNSGGGNRSSKYWIFSMIIERSAGPKRVDMAGDDVESPLEAI
LPAEPQVEQVCLLRDSPFRILRAAESGNLDDFKRLFMADNTRITLQDGKGRTAAHQAAAR
NRVNILRYIRDQNGDFNAKDNAGNTPLHIAVECDAYDALDYLLSIPVDTGILNDKKQAPV
HLATELNKVKSLRVMGQYRNVIDIQQGGEHGRTALHLAAIYDHEECARILITEFDACPRR
PCNNGYYPIHEAAKNASSKTMEVFFQWGEQRGCTREEMISFYDSEGNVPLHSAVHGGDIK
AVELCLKSGAKISTQQHDLSTPVHLACAQGAIEIVKLMFEMQPLEKRICLSCTDVQKMTP
LHCASMFDHPDIVSYLVNEGAEINALDKEHRSPLLLAASRSGWKTVHLLIRLGASIDVKD
AAARNVLHFVIMNGGRLTDFAEQVANCQTQAQLQLLLNEKDNMGCSPLHYASRDGHIRSL
ENLIRLGACINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINESDGAGMTPLHIA
SQQGHTRVVQLLLNRGALLHRDHSGRNPLQLAAMSGYTETIELLHSVHSHLLDQLDKDGN
TALHLATMENKPHAISVLMSMGCKLVYNVLDMSAIDYAIYYKYPEAALAMVTHEERANEV
MALRSDKHPCVTLALIASMPKVFEAVQDKCITKANCKKDSKSFYIRYSFAFLQCPYMFAK
IDEKTGEPIMTSNPIPLPALNTMVTHGRVELLAHPLSQKYLQMKWNSYGKYFHLANLLIY
SIFLVFVTIYSSLMMNNIELRSGDNKTTSQYCNLGWDVLTRNLSHGPAMAAQIRPDSCVE
SINRTTAILFCAVVIVVYILLNSMRELIQIYQQRLHYLVETVNLISWVLYISALIMIAPA
FKPDGAINTIHYSAASIAVFLSWFRLLLFLQRFDQVGIYVVMFLEILQTLIKVLMVFSIL
IIAFGLAFYILLSKIIDPQPNHLSFSNIPMSLLRTFSMMLGELDFVGTYVNTYYRDQLKV
PMTSFLILSVFMILMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPHV
WLQRVDKMELIEYPNDTKCKLGFLDFILRKWFSNPFTEDSAMDVISFDNNDDLINAELER
QRRKLRDISRMLEQQHQLVRLIVQKMEIKTEADDVDEGISPNELRSVVGLSSAGCNRWNS
PRIRNKLRAALSFNKSM
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtattcaaggctgctgaaaagaaactaaccttagaacgtttctcattggaagtc
agtcgcgatttgcgaccctttaccatcacaacagctggcacagatcccgatcaggcgagc
atcgaagtcaaaatgcccaagctctggaatggtgtatacaatgcgcaatgcgcggctctc
ccatcgccagatctgatggaggcccagcccaaaatcttgcccaagacccgctccaacaac
agcggcggcggcaatcgcagcagcaagtactggatattctcgatgataatcgagcgaagt
gcgggtcccaagcgtgtggacatggctggggatgatgtggagtccccgttggaggccatt
ttgccggctgagccgcaggtggagcaggtctgcttgttgcgtgacagcccctttaggata
ctgcgggctgccgagtcgggcaacttggatgattttaagcgtctgttcatggcagataac
acgcgcatcacgctgcaggatggcaagggacgcactgcagcacatcaggcggcggcccgg
aaccgtgtcaacatattgcgctacattcgcgatcagaacggagacttcaatgccaaggac
aatgccggcaatacaccgctgcatattgccgtcgaatgcgatgcctacgatgctctggac
tatttgctctccattcctgtcgatacgggcatcttgaatgataagaaacaggcgccggtg
cacttggccacggagctgaacaaggtcaagtctttgcgtgtgatgggccaatatcgcaat
gtcatcgacatacagcagggtggcgagcatggacgcactgcactccatttggctgccatc
tacgatcacgaggagtgcgcccgtatcctgattacagagttcgatgcatgcccccgtaga
ccctgcaacaatggttattatcccatacatgaggcggctaaaaacgccagctccaagaca
atggaggtcttttttcagtggggcgagcaacgcggctgcactcgcgaggaaatgatatcc
ttctacgattccgagggaaatgtgccgctgcattcggcagtgcacggcggggacattaaa
gccgtggagttgtgcctcaaatctggcgccaagatatcgacacagcaacatgatctctcg
acgcccgtgcacttagcgtgcgcccagggcgctattgaaatagtaaagctgatgtttgag
atgcagccactggagaagaggatttgtctcagctgcacggacgtacagaagatgacgccg
ctgcactgcgcttcgatgtttgatcacccggacatagtctcgtacctggtcaacgagggt
gcggaaatcaatgcgctggacaaggagcatcgatcgccactgctgctggctgcctcgcgt
agtggctggaaaacagtgcatctgctgatacgtctgggcgccagcattgatgtgaaggat
gccgccgcgcggaatgtgctgcactttgtcatcatgaacgggggtaggctgacggacttt
gccgagcaggtggccaattgccagacacaggcgcagctgcagctgctgctcaatgagaag
gacaacatgggctgctcgccgctgcactatgccagccgggatggtcatatacgttcgctg
gagaatctcatacggctcggcgcctgcatcaatctgaagaacaacaacaacgagagtccg
ctgcactttgccgcacgctacggcagatacaacacggtccggcagctgctcgactccgag
aagggctccttcatcatcaacgagagcgacggagcgggcatgacgccgctgcacattgcc
tcgcagcagggacacacgcgtgtggtgcagctgctcctgaaccgaggcgcattgctgcat
cgcgaccactcgggccgcaatccgctgcagctggcggccatgtccgggtataccgagacc
atagagctactgcactcggtccactcacatctgctggaccagctggacaaggatgggaat
acggctctgcacttggccaccatggagaacaagccgcatgcgatatccgtgctgatgtcc
atgggctgcaagctggtctacaatgtgctggacatgagcgccatcgactatgccatctac
tacaaatatccggaggcagcgctggccatggtcacgcacgaggaacgggccaacgaggtg
atggctctgcgctccgacaaacatccgtgcgtcaccctggctctgattgcctctatgccg
aaggtgtttgaggcggtgcaagacaagtgcataacaaaggccaactgtaagaaggactcg
aagagcttttacattaggtactcattcgcattcttgcaatgtccctatatgtttgccaag
atcgatgagaaaaccggagagccgatcatgacatccaatcccattccattgccggccctg
aataccatggtcacgcatggacgcgtggagctgctggcccatccgctcagtcaaaagtat
ttgcaaatgaaatggaactcttatggcaaatattttcatctggccaatctgctgatctac
tcgattttcttggtctttgtcacaatctattcctcgctgatgatgaacaatattgagctg
cgttccggcgacaacaaaaccaccagtcaatactgcaacttgggctgggacgtgctcacc
aggaatctatcgcatggcccagcgatggcagctcaaatccggccggactcgtgcgtggag
agcatcaatcggacgacggccatactcttttgtgccgtggtcattgtggtctacatattg
ctcaactcgatgcgcgaactgatacagatctatcagcagcgtttgcactatctggtggag
actgtcaatctcatctcctgggtgctctacatatccgcattgataatgatagcgcccgcc
tttaagccggatggcgccatcaataccatacactattcggcggcatccattgccgtcttc
ttgtcctggttccgtttgctgctctttctgcagcgcttcgatcaggtcggcatctatgtg
gtcatgttcttggagattctgcagaccctgatcaaagtgctgatggtcttctccatactg
attattgcttttggcctcgcattctacatattgctctcgaagataattgacccacagccg
aatcacttgtccttctcgaacatacccatgtcgctgctgcgcaccttctccatgatgctg
ggcgagctggattttgtgggcacctatgtcaacacctactaccgcgaccagctgaaggtg
cccatgacttcctttttgattctgagtgtgtttatgattctgatgcccattctgttgatg
aacttgctcatcggtttggctgttggcgatatcgagtcggtgcgtcgcaatgcccaactg
aaacgtctggccatgcaggtggtgctccacacggagctggagcgcaagctgccccacgtc
tggctgcagcgggtggacaaaatggagctaatcgagtatcccaatgacacaaaatgcaag
ctcggtttcttggactttatcttacgcaaatggttctcgaatccgttcaccgaggattct
gccatggatgttattagcttcgacaacaacgacgacctgatcaatgccgagctggagcgt
cagcgccgcaagctgcgtgacattagccgcatgctggagcagcagcatcagctggtgcgt
ctcattgtgcagaagatggagatcaaaacggaggccgatgacgtggacgagggcatctcg
cccaacgagctgcgctccgttgtgggcctcagctcggccggctgcaatcgctggaactcg
ccgcgcatacgcaataaattgcgtgccgcgctgagcttcaacaagagcatgtag
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