KEGG   Drosophila virilis: 6623547
Entry
6623547           CDS       T01066                                 
Symbol
U4-U6-60K
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dvi  Drosophila virilis
Pathway
dvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6623547 (U4-U6-60K)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dvi03041]
    6623547 (U4-U6-60K)
Spliceosome [BR:dvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    6623547 (U4-U6-60K)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C PRP4 ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR19_1st MIOS_WD40 WD40_like WD40_RFWD3 WD_LRWD1
Other DBs
NCBI-GeneID: 6623547
NCBI-ProteinID: XP_002046882
UniProt: B4LFC6
LinkDB
Position
3:9339919..9341891
AA seq 541 aa
MSDDDDIQYIKRQRTLHYGSLEETERKRQTAAASSVAGTTPAAVTTTTAQLEDIDSDEDY
EESNKKSNATKVAMPPPTAASLANKIDDDYFDLEGEMERDKVALLEEFERKKRARQINVS
TDDSEIKNNLRQLNEPICYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKLQQREQ
EATWYHEGPETLRVARLWLADYSLPRARDRLERAREALEVPSATRAGRMVEMQKKLQSLA
PLCSQVGDTRPVSSAAFNEDSSLLMTASWSGLCKLWSVPDCELKQTLRGHASYVGGVALR
PGVKLDEQNVVAMASGGHDGAVKLWGFGNEESIADITGHMPHRVSKVSFHPSGRFLATAC
YDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYQSDGSVLVTGGLDAFGRVWDLRTGRCIMF
LEGHLGAIFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQDGG
SFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDVSPNSQYIATTSFDRTFKLWASD
S
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgtccgatgacgacgatatccagtacataaagcggcagcgcaccttgcattatggctcg
ctggaagaaacagaacgcaagcggcaaaccgccgcggcgtcctctgttgccggcacaacg
ccggcagcagtaacaacaactaccgcccaactggaagacattgattcggacgaggactat
gaggaatctaacaaaaagtccaatgcgacaaaagtcgccatgccaccgcccacagccgcg
tcgcttgctaacaaaatagacgatgactacttcgatctggagggcgagatggagcgcgac
aaggtggcgctcctggaggagttcgagcgaaagaagcgcgctcgccaaataaacgtatcc
acagacgattccgagattaagaacaatcttcggcagttaaacgagccaatttgctacttt
ggtgagggcccagcggagcgacgcagacgcctcaaggagctgctcgccagcctgggcgag
aatgccatcaagcaaaagcaaaccgaggaggaggagcgcaagttgcagcaaagagagcag
gaggctacctggtaccacgagggacccgaaacactgcgtgtggcgcgcctttggctcgcc
gactactccctgccacgtgctcgcgatcgtctggagcgtgctcgggaggcgctcgaagtg
cccagcgccacgcgagccggtcgcatggtggaaatgcaaaagaagctacaatccctagcg
ccgctgtgctcgcaggtgggcgatacgcggcccgtcagcagcgctgcattcaacgaggac
tcctcccttctgatgacggcctcatggtcgggcctgtgtaagctatggagcgtgcccgac
tgcgagctgaagcaaacgctgcgcggtcatgccagctacgtgggcggcgtggcgctgcgg
ccgggcgtcaagctagacgagcagaatgtagtggccatggcctcgggcgggcacgacggt
gccgtcaaattgtggggctttggcaacgaggagtccatcgctgacataacgggacacatg
ccgcaccgcgtatcaaaggtgtcgtttcatccatcgggccgttttctggccaccgcttgc
tatgattcctcgtggcgtctgtgggatctggagcagaagactgaggtgctgcatcaggag
ggacacgccaagccggtgcactgcctcagctatcaatcggatggcagtgtcctggtcacc
ggcgggctggatgctttcggacgtgtttgggacctgcgcacaggacgttgcatcatgttc
ctcgagggccatttgggcgccatattcggcgtagacttctcgcccaatggctttcatata
gccaccggctcgcaggacaacacctgcaagatctgggacctgcgtcgtcgccagcccgtc
tacaccataccagcgcacacaaatctcatatcggacgtgaagtaccagcaggatggcggc
agctttctggtcacctgctcctacgattcgacaacgaagatctggtcgaacaagacgtgg
cagccgctcaagacactgcagggccacgacaacaaggtcatttccgtcgacgtctccccc
aactcgcagtacatagcgaccacctcgttcgatcgcaccttcaagctgtgggcgtcggat
agttga

DBGET integrated database retrieval system