Drosophila virilis: 6623856
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Entry
6623856 CDS
T01066
Symbol
Gem3
Name
(RefSeq) uncharacterized protein Gem3
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6623856 (Gem3)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6623856 (Gem3)
Spliceosome [BR:
dvi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
6623856 (Gem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF7533
AAA_22
Sp-DndD
AAA
Motif
Other DBs
NCBI-GeneID:
6623856
NCBI-ProteinID:
XP_002047841
UniProt:
B4LES6
LinkDB
All DBs
Position
3:complement(18353117..18357028)
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AA seq
1068 aa
AA seq
DB search
MESALAHDLENTEQRTSDVAAGSVSFEELNLNKNLTKCLKSHKFLTPTKIQAAAIPIAIA
GMDLLVQSKSGTGKTLIYVLAALQKMDKSVPNPQALIIVPTRELAIQVEDTVNGLANKLR
NKNAYLGVSFIGGTDVKRDRMRMARGRIVVGTPGRLIHLMQNKVFNTSAIKLLVLDEADQ
LYSTDSLQKDVQTILASLQPGSQIIACSATYPDALDERLAKLMNKPVLVSNSERATVLLG
VRQFVYELPEQANSMQEMMAKLAALHKIFAQLSYEQAILFASSQSRADSFRNYLQRDGVE
CDLMSGAMKQSDRLETFQAYRSFKMRTIVATDLMARGVDSSHANLVINLDPPNDLVTYLH
RIGRAGRFGAKGIAITFISSPQQCVSFKRIIADAGTGMSVLQFPVEKREGFNFWDYDSYD
FPYYLKTEAYEQEEGELKRIKQRWKPPSYDEQLPDTVEIGEDHSEADNTVDIDIQEQTEY
LPKGSVNQELVENDKPIEEIDIIEEQAREEENHVTAIEVEQVSTQIQNVEEQIKEYRVEP
AGKDETLNIDNTAAIHDTQIIMDNKENVSNNQAQVQNIDKTENVSKIVAEQFEKPPELRE
SPIELIELTPSVELPAAAPNSINTKTYCLVAPTERSSTTLHPLGISNTVDDASSIISDSM
ENDYDSDASYSSCYSESDVHNIWRHALTQQKLQKRRLRNAGRHIYHFNWRRNFPKTKHWT
CESGKNAEEQSQEWLDEPSDKEQLPEMNKGQSERRRKVKITRLLTLITKKHKFLHLLQKF
TNFSQIKEHLTAYIEKGKSDIQLSDKWIEQLYDAMRHLYYVDHSKPKHLKKHTLPDRPNL
ENYNRLMEIIRGHSCPQQPLSKLSVHVNQQLNIPPANGIDENGNAGEAFSENSESGSSYV
PPEDRLHANDDISENESVGADSLEPYSSSGFVESAESASSGIDTSQYDTNSSMVLESDES
EGEESSTNDEEDDVETDEHSNASNTDSSSLSTLTAESDNANESESESENEEQDEESSPDT
SGTNASSVSDAADELALAQARWQYLFQMQYQFIANYVTNYLATYQRQN
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcattagcgcatgatttggaaaatactgagcaacgcacaagcgatgtggcc
gctggctctgtttcgtttgaggaactcaatttgaacaagaacctcacaaaatgcctgaag
tcacacaaatttttgacgccaaccaaaattcaagctgccgcaattcccattgcaattgct
ggaatggatctgctggtgcagtccaaaagtggaactggcaaaactttgatttatgtgctg
gccgcactgcagaagatggataagtcggtgcccaatccgcaagcattgataatagtgcca
acgcgcgagctggccatacaggtggaggacactgttaacggcttggccaataagctgcgg
aacaaaaatgcttatctgggcgtaagctttattggtggcacagacgtgaaaagagatcgc
atgcgcatggctcgcggtcgcattgtggttggcacaccaggtcgactgatacacctcatg
cagaacaaagtattcaacacgtccgccataaagctgctcgtgctggacgaggcagatcag
ttgtattcgactgattctctgcaaaaggatgtccagactattctagcatcgctccagccc
ggaagccagatcattgcatgtagcgctacctacccggatgcactggacgaacgtctggcc
aagttgatgaataaaccggttctggtttcgaacagtgagcgtgcgacagtattgcttggt
gttcgccaatttgtctatgagctgccggagcaggcaaacagtatgcaggaaatgatggcc
aaactggctgcgctgcacaagatttttgctcaattgtcctacgagcaggccatactcttt
gccagctcacaaagtcgggccgactcatttcgcaactatttacaacgcgatggcgttgaa
tgcgatctaatgtcgggcgctatgaagcagagcgatcgccttgagacatttcaggcttat
cgcagttttaaaatgcgcacaatagtcgccacagacttgatggcacgcggcgttgactct
tcccatgctaacttggttattaatttggatccgcctaacgatctggttacttatttgcat
cgcattggacgtgccggtcgctttggcgccaagggcattgccattacttttatatcctcg
ccgcagcaatgcgtaagttttaagcgtattattgccgatgctggcactgggatgtcggtg
ttgcaatttcccgtagaaaaacgcgaaggcttcaacttttgggattacgattcctatgat
tttccctactatttgaaaacagaggcgtatgagcaagaggagggcgaactaaagcgaatt
aagcagcgctggaagccaccgagctatgatgagcaattaccggatacggttgaaatcggt
gaagatcattcggaagcagataatactgttgatattgatatacaagaacaaacagagtat
ttgccgaaaggctcagtcaatcaggagctcgttgagaacgacaagccgattgaagagatt
gatattattgaggaacaggctcgtgaggaggaaaaccacgtaactgccattgaagtggaa
caggtttcaactcaaatacaaaatgtggaagaacaaatcaaagagtatagggttgaaccc
gcaggcaaggatgaaacgctaaatatagacaatacggcagcaatacatgacacgcaaatt
atcatggacaataaggaaaatgtctcgaataaccaagcacaggtacaaaacatagacaaa
accgaaaatgtgagcaaaatagttgcagaacaattcgagaaacctccagaattgcgagaa
tctcccattgagctcatagagctgacaccttcggttgaattgccggcggctgcaccaaac
tcgattaatactaaaacctattgcttagttgcgcccacagagcgaagctcaaccacattg
cacccattgggcatatcaaatactgtcgatgatgccagcagcataatatcggacagcatg
gagaatgattacgatagtgatgcttcatacagtagctgctattcagagagcgatgtgcac
aacatttggcggcatgcattgacacagcaaaagctgcaaaagcgccgtctacgcaatgct
ggacgtcacatataccactttaattggcgccgcaattttccaaaaactaagcattggacc
tgcgaaagtgggaaaaatgccgaagagcagtcacaggagtggctggatgaacccagtgat
aaagagcagctgcccgaaatgaacaagggacagagtgaaagacgtcgtaaagtcaaaata
actagactcctaactttgatcacgaagaaacataaatttttgcatctgctacagaagttt
acaaacttttcacaaatcaaagaacatctaacggcctacatcgagaagggtaaaagtgat
attcaattgtcggataaatggatagagcagctttacgatgcaatgcgtcacttgtactat
gtggatcatagcaagccaaagcatttgaaaaaacacaccttgccggatagacccaactta
gagaattacaataggttaatggaaatcataagaggtcattcatgtccacaacagccgttg
agcaagctaagcgtacatgtgaatcagcaactaaacataccacctgctaatggaattgat
gaaaacggtaacgctggggaagccttttcagagaattcggaatcaggatcttcatatgtg
cccccagaagacagactacatgctaacgatgacattagtgaaaatgaaagtgtgggagct
gatagcttggagccgtattcatccagcggttttgtggagtcagctgagagtgcatcctcg
ggcattgatacttcacaatatgacaccaattcgtcgatggttttggagtcggacgagtct
gagggagaggagtcatcgactaatgatgaagaggatgacgttgagactgacgaacacagc
aatgctagcaatacggactctagttcattgagtacactaaccgcagaaagcgacaatgct
aatgaaagcgaaagtgaatctgaaaatgaggaacaagatgaagagagcagtccggatacg
agcggcactaatgcaagctctgtgagtgatgctgccgatgagcttgctttggctcaggcc
cgctggcagtatttattccagatgcagtatcagtttattgccaactatgttaccaattat
ttggcgacctatcaacgccagaattaa
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