Drosophila virilis: 6623901
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Entry
6623901 CDS
T01066
Symbol
roq
Name
(RefSeq) roquin-1 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvi03000
]
6623901 (roq)
04121 Ubiquitin system [BR:
dvi04121
]
6623901 (roq)
Transcription factors [BR:
dvi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
6623901 (roq)
Ubiquitin system [BR:
dvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
6623901 (roq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
6623901
NCBI-ProteinID:
XP_002046239
UniProt:
B4LI37
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All DBs
Position
3:complement(3024840..3032423)
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AA seq
963 aa
AA seq
DB search
MPIQAPSWTDFLNCPICCNEFEASQRVPISLGCGHTICKPCLTTLYNRQCPYDQTLIVTD
IENLPLNYALLQLVGNGSGGTGGGGAAEEELADLAPSVLKLQPEQLKCYKLGRKCIEELA
LHLKSFLNLNSSNLLTRPMQRKLVTLVNCQLMEEEGRVRALRAARSLGERTVTELILQHQ
NPQQLSSNLWAAVRTRGCQFLGPAMQEEVLKLVLLALEEGSALSRKVLVMFVVQRLEPRF
PQASKTSIGHVVQLLYRASCFKVSKREADSSLMQLKEEFRTYDALRREHDAQIVQIATEA
GLRIAPEQWSSLLYGDITHKSHMQSIIDKLQTPSAFAQSVQELVIALQRTSDPAKLAQLH
NHLQYLASIDPCAETASWEDVSKALDAVKHAVMGLVHFLQHHGIRKPQESSLAGGSANNN
NTKYKISLCRDLNHRRVCPRGASCTFAHSQEEVERYRARNRGKHIKSSMPMAMPSIPPGG
KKPLPLGSEVPAHTGPMMPISPIRYMQPPAQPTRGFLEPNCSIPPAAHNLPPSGVHPQLL
RAHHSPIGRQQQQQHAALNGLLVPPAPGRYEQRFNYGPAPAPSRNNATREYPGNSPTQPP
QRNPPNYNNISNNNNNNNNNNIHNHNKSFCSMLPTDVYHSPYFGNEATGNSKGNAELPAA
TKLGHPAASGNPWEHTYMPQALATLPPPSSKYPSRVMSTILPATADTSFYEKKPPSNNVN
IDLDVESAAHAESMPLFRPNNNNNNSSSGNNNNSSSSNNNNNNNNISLIFWNNSNKDSAN
FVRSDSILDDDASTSDVPTGSSMHSRYGPICPKRSTTNWHNWPMEHDPNNKNEFLSDKST
TAGELNFAGFEPKPAYKPEHNDNLNVNANKNSAGRDSVYIWNNDLNANATSPSSNYWNNS
SSSSEPAGSHNERLKQLDGKPMLLSEDSLEGGIDSGMMSELEKNLVDIVEVWSNPDDSGI
KLD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcaggcgccctcatggacagactttctcaactgtcccatctgctgcaatgag
ttcgaagccagccagcgtgtgccgatcagcctgggctgcggccacacaatatgcaagccc
tgtctgaccacgctctacaatcggcaatgtccctacgatcagacgcttattgtaacggat
atcgaaaatttgccgcttaattatgcactgctgcagctggtgggcaatggcagtggcggt
acaggtggtggtggcgccgccgaggaggagctggcagatctggcaccaagtgtgcttaag
ctgcagccggaacaactaaaatgctacaagctgggcagaaaatgcatcgaagaattggcc
ttgcatttaaaatcgtttctaaatttgaacagcagcaatttgctgacccggcccatgcag
cgcaaactggtcacgcttgtcaactgccagctaatggaggaggagggtcgcgtgcgtgct
ttacgagctgcacgttccttgggcgaacgcactgtcaccgaactgatattgcagcatcag
aatccgcagcagcttagctcgaatctttgggcagcggtacgcactcgaggctgtcagttc
ctgggacccgccatgcaagaggaggtgctgaagcttgtcttactggcgctggaagaaggt
tcggcgctctcacgaaaagtacttgtcatgtttgtggtgcaacggctggagcctcgcttt
cctcaagcgtctaagacgagcattggtcatgtggtgcagctgctctatcgtgccagctgc
ttcaaggtgtccaagcgcgaagcggactcctcgctgatgcagctaaaggaggagtttcgc
acttatgatgcactgagacgcgaacacgatgctcagattgtgcagattgccaccgaggcg
ggactgcgcattgcgcccgagcagtggtcatcgctgctgtatggcgacattacgcacaag
tcccacatgcagagcatcattgacaagctgcagacgccgtctgcatttgcacagtccgtg
caggagctggtcattgcgctgcagcgcaccagcgatcccgccaagctggcacagctgcac
aatcatctgcagtatttggccagcattgatccgtgcgctgagacagctagctgggaggat
gtatccaaggcgctggacgctgtgaagcatgccgtcatgggtctagtacatttcctgcag
catcacggcatacgcaagccacaggagagcagtctagccggcggctctgccaacaataac
aacacaaagtacaagataagtctgtgccgggacctgaatcatcgacgggtatgcccacga
ggcgccagctgcacatttgctcactcgcaggaggaggtggaacgctatcgcgcccgcaat
cgtggcaagcatattaaatcatccatgcccatggcaatgcccagcataccaccaggtggc
aagaaaccgctgcccctgggcagcgaggtgcccgcacacaccggcccaatgatgcccata
tcgcccatacgctatatgcagccaccagcacagccgaccagaggcttcctcgagcccaat
tgcagcataccgcctgcagcacacaatcttcccccaagcggtgtccatccacaattgctg
cgcgcacatcacagtcccattggtcgccagcagcagcagcagcacgcggcgctcaatgga
ctgctggtgccaccggcaccaggacgctatgagcaacgttttaattatggcccggcgccg
gctccgtcgcgcaataatgccacgcgtgagtatccgggcaattccccgactcagccgccg
caacgcaacccaccgaactacaacaacatcagcaacaacaacaacaacaacaacaacaac
aatatacacaaccacaacaagagcttctgcagcatgcttccaacggatgtatatcattcg
ccctactttggcaacgaggccacggggaacagcaaaggcaacgccgagttgccagcagct
acgaaactgggtcatccagctgctagcggcaatccgtgggagcatacatatatgccacaa
gcattggcaacgctaccgccgccgtccagcaagtatcccagtcgagttatgtccacaatt
ttacccgcaacagccgatacctcattttatgaaaagaaaccgccgagtaataatgttaat
attgatctggatgtggagagtgcagcccatgctgaatccatgcccttgtttaggcccaac
aacaacaacaacaacagcagcagcggaaacaacaacaacagcagcagcagcaacaacaac
aacaacaataacaatatctcattaatattctggaataactccaacaaagattcggccaac
tttgtgcgttccgactccatattggatgacgatgcatcaacctcggatgtgcccaccggc
tcctcaatgcacagccgctacggccccatatgtcccaaacgctcgacgactaactggcac
aactggcccatggagcatgacccaaacaacaaaaacgagttcctcagcgacaagagcaca
acagccggcgagctaaactttgcaggattcgagccaaagccagcctacaagccggagcac
aatgacaacctcaatgtcaatgccaataagaattcagctggacgtgatagtgtgtacatt
tggaacaacgatctgaatgctaacgcaacaagcccctcgagcaattattggaacaacagc
agcagcagcagcgagccagcagggtcccataacgaaagactgaagcagctggatggcaag
ccgatgctgctctccgaggacagtttggagggtggcatcgatagcggcatgatgagcgag
ctggaaaagaatctagttgacattgtcgaggtctggtcgaatccggatgatagcggcata
aagctggactaa
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