Drosophila virilis: 6624107
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Entry
6624107 CDS
T01066
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dvi
Drosophila virilis
Pathway
dvi03022
Basal transcription factors
dvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6624107
09124 Replication and repair
03420 Nucleotide excision repair
6624107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6624107
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6624107
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
6624107
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6624107
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6624107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
6624107
NCBI-ProteinID:
XP_002047852
UniProt:
B4LET7
LinkDB
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Position
3:18538459..18541251
Genome browser
AA seq
809 aa
AA seq
DB search
MGPPKKSKKDRGASDKFAKKRRAEDEAFTQLVEDNDSMDNASESDGVPGAASKNAETNDE
NINTDEYGAKDYRSQMQLRPDHANRPLWVAPNGHVFLESFSPVYKHAHDFLIAISEPVCR
PEHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTTIPEGILEFIRLCTLSYGKVKLV
LKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEGFIQGTMDGKAITQFGTKLPAGPD
KPGEDSASTSAAATAAAAPAEGAAATVTVPEDITDFYEKIDKEEEDEDEANLKTVSFEVS
QEKIELIQKRCIEIEHPLLAEYDFRNDTNNPDINIDLKPAAVLRPYQEKSLRKMFGNGRA
RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFT
SEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRR
VLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKKGYIARVQCAEVWCP
MSPEFYREYLTTKTSKKMLLYVMNPSKFRSCQFLIKYHEKRGDKTIVFSDNVFALKHYAI
KMNKPFIYGPTSQNERIQILQNFKFNAKVNTIFVSKVADTSFDLPEANVLIQISSHGGSR
RQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYKVITHL
KGMDTETDLMYGTQEEQGQLLQLVLSASDLDCEDEKVPGEPGYRPSGAGGTTRRMGGLSS
MSGGDDAIYYEHRRKNVGSVHPLFKKFRG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggggccgccaaaaaaatcaaaaaaggaccgtggtgcgagcgataaatttgctaagaag
cgtcgcgcggaggatgaggcgttcacccagctggtggaagacaatgacagcatggacaac
gccagtgagtcggacggagtgcccggcgccgcatcaaagaacgccgaaaccaatgatgag
aacatcaacacagacgaatacggtgcaaaagattatcgcagccagatgcaactgcgccca
gatcacgccaatcgcccattgtgggtggcacccaatgggcacgtgtttcttgagtccttt
tcgccggtctacaagcatgctcatgactttctcattgccatctcggagccagtatgtcgg
ccggaacacattcacgaatacaaactgacggcctatagcttgtatgcagctgtgtctgta
ggactgcaaacacacgacattgtggaatatctgaagcgcttgagcaagaccaccattcca
gaaggcatattggaattcatacgcctttgtacgctctcgtacggcaaagtgaagcttgtg
ctgaagcataacaaatattttattgagtccccacatccagaggtgctgcagaaattgctt
aaggacccggttattcaaaagtgtcgactgatacgcagcgagggcgagggttttatacaa
ggcaccatggatggtaaagctattacccagttcggcaccaagttaccggcggggcctgat
aagccaggggaagattcggctagcacctcggcagcagcaacggcggccgccgcacccgca
gagggtgccgctgcaactgttacagtacccgaggacattaccgacttctacgagaagatt
gacaaggaagaggaagatgaggacgaagctaatctaaagacagtatcatttgaggtatcg
caagaaaaaattgagttaatacaaaaacgctgcattgaaatcgagcatccgctgttagca
gagtatgattttcgcaatgataccaacaatccagatattaatattgatctgaagccagca
gccgttctgcgtccataccaggaaaagagcctgcgcaaaatgtttggcaatgggcgagcc
cgctcgggcgtaattgtactgccgtgcggcgcaggtaaatctttagtaggtgtcactgct
tgttgtacagtgcgtaagcgggcattggtgctgtgcaacagtggcgtgtcagtggaacag
tggaaacagcagttcaagatgtggtccacggcagatgatagcatgatttgccggtttaca
tcggaggctaaggataaacctatgggctgtggcatattagttaccacatactcaatgatt
acacacacacagaagcgttcatgggaggcggaacaaaccatgcgctggctgcaggagcag
gaatggggcatcatggtgttggacgaggtacacaccattcccgcaaagatgttccgccgt
gttctcaccattgtgcagtcccactgcaaacttggcttaacggctacgctactgcgtgag
gacgacaaaattgcggacctcaattttttaattggtcccaagctgtacgaggcaaactgg
ctagagctccaaaagaagggctatatagcacgcgtgcagtgtgccgaggtatggtgtccc
atgtcaccggagttctatcgtgaatatctaaccaccaagacgtctaagaaaatgctgctc
tatgtgatgaacccctcaaagtttcgcagctgccaatttctaataaaatatcatgaaaaa
cgtggcgacaaaactattgtcttctctgacaatgtgtttgccttaaaacactatgccatc
aagatgaacaagccgttcatctatggacccacatcccagaatgaacgtatacaaatccta
cagaatttcaagtttaatgccaaggtcaacaccatatttgtgtccaaagtggccgatacc
agttttgatctgcccgaggcaaatgtgctcattcaaatttcgtcgcatggcggctcacgt
cgccaagaggcacagcgtttgggtcgtattctacgcgccaaaaagggtgccattgccgag
gaatacaatgcatttttttacacgctcgtttcccaggatacaatggagatgagctattcg
cgcaagcgccagcgtttccttgtgaatcagggctatagctacaaggttataacacatctt
aagggcatggacactgaaaccgacctaatgtacggaacacaggaagagcagggccagctc
ttgcaactggtgttgtctgcctccgatttagactgcgaggatgaaaaagtgccaggcgaa
ccgggttatcgtcccagcggtgctggtggcacgacaagacgtatgggcggcctcagctca
atgtcaggtggtgatgatgccatctactatgagcatcgacgcaagaacgtcggcagcgtg
catcctttgtttaagaaattcagaggataa
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