Drosophila virilis: 6624433
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Entry
6624433 CDS
T01066
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
dvi
Drosophila virilis
Pathway
dvi03013
Nucleocytoplasmic transport
dvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6624433 (Srrm1)
03015 mRNA surveillance pathway
6624433 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6624433 (Srrm1)
03041 Spliceosome [BR:
dvi03041
]
6624433 (Srrm1)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6624433 (Srrm1)
Spliceosome [BR:
dvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
6624433 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
6624433
NCBI-ProteinID:
XP_002047467
UniProt:
B4LC09
LinkDB
All DBs
Position
3
Genome browser
AA seq
1068 aa
AA seq
DB search
MMFTGTNQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIE
DDVVVEFVYNQLEEEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAE
FIQQKKDEILKREEEQQKQRQQQRQRDLSRSRSRSPSRPRDKQRRHDRSKSRSRSRSAPK
IVATSNNGSAVGPINSAAREAAANAAARLRKRGGGSPGAAGGTSNAAASAGGGRGASRER
RTSRRRSHSRSRSNRSAQRAGSTDAGGTAKTLNGRHSVQKSSPAAAPKSKSKAKSRSRSH
SRSSRSRTRSRSGGKGSPARSRSRSSSRSSARSNRRRRSSRSRASSISLSPERQQDHQFE
HRRNKNSVQNKRQYRNNRDGSASSIERGDGRARQFGGGGGGRRPPPQGRRFSPRGRSPMR
QDNGGGGGRFQRSNSRRRSRSRMLSRSPMRYSRSPRRFNNRRRSPQMHFRGGGGGRGRGG
GNHRNMWQQQYRGGSPNQRGGGRIHWQARHNSPNGGRRFDRRQSPPGGGGGGGGGGQHRY
SRDRRGSPGAQGNQQQGQQFRKQFSPGRGRFDRRGSPQGNFNRWDQNHPDQRQPMPAMRN
QQQQQRIRRSSSGSASPAARRQPQRSVSPLPRNRSRSRSRSSVRPTKRSRSRSRSPHSRS
RSNSRQRPQPQQQRRRASPAAVRRSVEFAGPSVNTIDLCREEPPPPPPLPATEQQPQRKL
ESQQQTLPQPQQSLSQPPSQQPTQPARRSFASLSRTPSPFLKSHERSVVSASAAAAPKKA
RDNSQSSSSDSSAEDSDDSDDEDQPPPKKRHQSRRSAPSGKSQNAKTKATATEPRAKSSS
KAKVSRSSASSSSSEHSDDSSDDRHKKKSQPKRKEETIASRGEKEKQRRSGDKKLQRSTS
SEAVPPEALVEKQRSLDRSRKRSHKKSRRDGSGVGGGGGGVGGDASESEEERLPKKKRKK
SKKAADTSDSDSASEAESSSKKKKHKKHKKHSKKSKKHKKHKRKSSSSAKHRQESSSQSS
ADDDEELSTRAGKRNGKLPLMLTGGPGINEDLEKQLRERALKSMKKLD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgggcaccaaccagcagcaggacacgcgctttagcgacaaggaaaagaag
ctaatgaagcaaatgaagttcggtgattgcctcaacaagcgcgtggacatgtccaaggtg
aagctagatgtgctgcgaccttggataagcaaaaaaatcactgatattctgcacatcgag
gacgatgtcgttgttgagtttgtatacaatcagctggaggaggagaaatatccttgcccc
aaaaaaatgcaaattaatatgaccggcttccttaacggacgcaatgcgcgccaatttatg
ggtgaactttgggcgctgctgctctcggcacaggagagcgacagcggcatacccgctgaa
tttatacagcagaaaaaggacgagatactcaagcgcgaggaggagcaacaaaagcaacgc
cagcagcagcgtcaacgtgacttatctcgttcccgctctcggtccccgtcccgcccacgg
gacaagcagcgacgtcacgacagatccaagtcgcgttcccgcagtcgctcagccccgaaa
atcgtggccacttccaacaatggcagcgccgtggggcccatcaacagtgctgcacgcgaa
gcggccgcaaatgcagcggcgcgtctacgcaaacgcggtggtggctcacccggtgcagca
ggcggtacatcaaacgcagcggcgtcggcgggcggtggacgcggcgcgtccagagaacgt
cgtacaagccgtcgccgctcacattcccgctcacgatccaaccgctcagcgcaacgagcg
gggtcaacggatgctggtggcactgccaagaccctaaatggacgtcactccgtacagaag
tcctcgcctgcggcggcgcccaaatccaaatcaaaggccaaatcgcgctcacgttcgcat
tcgcgatcatcgcgcagtcgcaccagatcccgcagcggaggtaaaggctcgccagcgcgt
tcgcgttcgcgcagctcctcgcgctcatcggctcgcagcaatcgacgtcggcgtagctca
cgctctcgggccagcagcatctcgctctcaccagaacgccagcaggatcatcagtttgag
catcgacgcaacaagaacagcgttcagaataagcgacaatatcgcaataatcgtgacggt
tccgccagctccattgagcgtggcgatggtcgtgccaggcaatttggtggcggtggcggt
ggacgacgaccaccgcctcaaggtagacgcttctcgccacgcggacgcagtccaatgcgt
caggataatggcggcggtggcggacgctttcagcgttccaattcccgacgtcgctcgcgc
tcccgcatgctctccagatcgcccatgcgctactccagatcacccaggcgtttcaacaat
cgccgtcgctcgccgcagatgcattttcgcggtggcggtggtggacgcggacgcggtggc
ggcaaccatcgcaacatgtggcagcaacaatatcgcggaggcagtcccaatcagcggggc
ggcggacgcatacactggcaggccaggcacaacagtcccaatggtgggcgacgcttcgat
cgccgccagtcaccgccgggaggtggtggtggtggtggtggtggtggtcaacatcgttac
tcacgcgaccgacgcggatcgcctggtgctcagggcaatcagcagcagggacaacagttc
cgcaagcagttctcgccaggccgaggtcgctttgaccgacgtggctcgccgcagggcaac
ttcaatcgctgggatcagaatcatcccgaccagcgtcaaccgatgccggcgatgcgcaat
caacagcagcagcaacgcatacgacgctccagttcaggcagtgctagtccggccgcgcgt
cgtcagccgcagcgcagtgtcagtccactgcccagaaatcgcagtcgcagccgcagtcgc
tccagcgtacgtccaacgaaacgcagtcgcagccgcagtcgcagtccgcacagtcgcagt
cgttccaactcgcgacagcggccgcagccgcagcagcagcgccgacgtgccagtcccgct
gcagtgcgtcggtccgttgagtttgccggtccctcggtcaacaccattgatctctgccgc
gaagagccgccgccgccgccgcctctgcccgccacagagcagcagccccagcgcaaattg
gagtcacagcaacagacgctgccgcaaccgcaacagtcgctgtcgcagccgccgtcacag
cagccaacgcagccagcgcgccgtagctttgccagcctttcgcgcactccatcgccgttc
cttaaatcgcatgagcgcagcgtcgttagcgctagcgcagccgcagcaccaaagaaagct
cgcgacaacagtcaaagcagcagctcggatagcagcgccgaggacagcgatgacagcgat
gatgaggatcagccgccgccgaagaagcgtcatcaatcgcgtcgctcggcgccaagcggc
aagagccaaaacgctaaaactaaagcaacggcaacggagccgagggccaagagctctagc
aaggccaaagtgtcgcgcagctcggccagcagcagcagcagtgagcacagcgacgacagc
agcgatgacagacacaagaagaagtcgcagccgaagcgcaaggaggaaacgattgcaagc
agaggcgagaaggaaaagcagcgtcgaagcggggacaagaaactgcagcgcagcacgtcc
agcgaggcggtgccgccagaggcattggtggagaagcaaagaagcttggaccggagccgc
aagcgaagtcataaaaagtcacgacgagatggcagcggcgtcggcggcggaggtggtggt
gttggtggcgatgcaagcgagtctgaggaagaacgtctgcccaaaaagaaacgcaagaag
tcaaagaaagcagcagataccagcgacagcgactctgcatcggaggctgagtcctcgtcc
aagaagaagaaacacaagaaacataagaagcacagcaagaaaagcaagaagcataagaag
cataagcgaaagagcagcagcagcgccaagcatcggcaagagagcagctcccagagcagc
gctgatgacgatgaggagctctccacgagggctggcaaacggaatggcaagctgccgctg
atgctcactggcggccctggcatcaatgaggatttagagaagcagctgcgcgagcgtgca
ttgaaatccatgaaaaagttggactga
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