Drosophila virilis: 6624435
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Entry
6624435 CDS
T01066
Symbol
Prp6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6624435 (Prp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6624435 (Prp6)
Spliceosome [BR:
dvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6624435 (Prp6)
Complex C
U5 SnRNP specific factors
6624435 (Prp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_16
TPR_2
FAT
TPR_1
TPR_8
TPR_12
ARM_TT21_N
ARM_TT21_C
TPR_21
NatA_aux_su
TPR_9
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
6624435
NCBI-ProteinID:
XP_002047585
UniProt:
B4LD46
LinkDB
All DBs
Position
3:complement(15572287..15575451)
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AA seq
931 aa
AA seq
DB search
MSNITAAVIANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
ATKRKKKDEEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADAIYDSIEKRMDEKR
KEYRDRRLREDLERYRQERPKIQQQFSDLKRSLATVTTEEWSTIPEVGDSRNRKQRNPRA
EKFTPLPDSVLSRNLGGETASSLDASSGLASMVPGVATPGMLTPTGDLDLRKIGQARNTL
MNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVQMARNLIMRGCEMNPQSEDLWLEAARLQPPDTAKAVIAQAARHIP
TSVRIWIKAADLETETKAKRRVFRKALEHIPNSVRLWKAAVELENPDDARILLSRAVECC
NTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIVDRS
LTSLTANGVEINRDHWFQEAIEAEKSGAVNCCQAIVKAVIGIGVEEEDRKQTWIDDAEFC
AKENAFECARAVYAHALQMFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEIL
WLMGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARG
SAPTPRVMMKSARLEWALERFDEALRLLAEAVEVFPEFPKLWMMKGQIEEQQKRTDDAAA
TYTLALKKCPTSIPLWILSANLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVELRA
GLKEIASTMMARALQECPNAGELWAEAIFMETKPQRKTKSVDALKKCEHDPHVLLAVSKL
FWSEHKFSKCRDWFNRTVKIDPDLGDAWAYFYKFELLHGTEQQQQEVLERCIAAEPTHGE
SWCSVSKCIRNWQFKTPDVLRAVVRELSVPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatataacagctgcggtaattgccaaccgcaataaaaagcatttcctaggcgta
ccagcgccgcttggctatgttgccggcgtgggacgtggcgccactggctttacaacacgt
tcggatattggtccggcgcgcgatgccaacgatgtgtccgatgatcgccacgcgccgcca
gccaccaagcgcaagaaaaaggacgaagaggaggaggaagatgaggatttaaacgactcc
aactatgacgagtttagcggctatagcggctctctcttctccaaggatccctacgacaag
gacgacgaagaggcggacgcaatttacgattctatagagaagcgcatggatgagaaacgc
aaggaatatcgcgacagacgcttgcgcgaggacttggagcggtatcgtcaggaacggccc
aagattcagcagcagttcagcgatctgaagcgctcgctggccacagtaaccaccgaagag
tggtccaccatacccgaagtgggcgacagtcgcaatcgcaagcagcgcaatccacgagcc
gaaaagtttactccgctgccggatagcgttctctcgcggaatctgggcggtgagactgca
tcctcattggatgccagctccggtttggcgtccatggtgcccggcgtggccacgcccggc
atgttaacgcccaccggcgatttggacttgcgcaaaattggacaggcgcgaaacacgctc
atgaatgtgaagctctcgcaggtatcggactctgtgacaggtcaaacggtggtcgatccc
aagggctatctgacagatctgcagagcatgatacccacctatggcggcgacatcaatgac
attaaaaaggcgcgtctgctgctgaagagcgtgcgtgaaacaaatcccaatcatccgccc
gcttggatagcctcggcgcgcttggaagaggtcacaggcaaggtacaaatggcacgtaat
ctgataatgcgtggctgcgaaatgaatccacaatccgaggatctctggctggaggcggcg
cgcctacaaccgcccgacacagccaaagctgtcattgcccaggcggcacgtcacattccc
acatcggtgcgaatttggatcaaggctgctgatctggagacggaaaccaaggccaagcga
cgcgtctttcgcaaagctctggagcacataccgaactcggtgcgtttgtggaaggcggcc
gtggagctggagaatcccgatgatgctcggatcttgctgtcgcgtgccgtcgagtgctgc
aacaccagtgtggagctgtggctggccttggcacgcctcgagacctacgagaatgcgcgc
aaggtgctgaacaaggcgcgtgagaatatacccacagatcgccagatctggacaacggct
gccaagctggaagaggccaatggcaacatacacatggttgaaaagattgtcgatcgttcg
ctgacatcgcttacggcgaacggcgtcgaaatcaatcgggatcactggttccaggaggcc
atcgaggcggagaagtcgggcgctgtcaattgctgccaggcaattgtgaaagctgttatc
gggattggtgtcgaggaggaggatcgcaagcaaacctggatcgatgatgccgaattttgc
gccaaggaaaatgcatttgaatgcgcgcgcgccgtctatgcgcacgccctgcagatgttt
ccatcgaagaagagcatttggctgcgtgctgcatactttgagaagaatcatggcacacga
gagtccttggaggcgctgctgcaacgcgctgtggcgcattgtcccaagtcggagatactt
tggctgatgggcgccaagtccaagtggatggcaggcgatgtgcccgctgcccgaggaatt
ttgtcgttggctttccaggcgaatcccaattccgaggatatttggctggcagccgtcaag
ttggagtcggagaactcggaatacgagcgtgcacgacgtttgttggccaaggcacgtgga
tctgcgcccacgccacgcgttatgatgaagtcggcgcgactcgaatgggcactggaacgc
ttcgatgaggcattgcgtttgctagccgaggccgtcgaggtctttcccgaatttccgaaa
ctctggatgatgaagggtcagattgaggagcagcaaaaacgcacggacgatgcggccgcc
acctacacgctggcattgaaaaagtgccccacctcgatacccctatggattttgtccgcc
aatctggaggagcgtaaaggtgtcttaaccaaggcgcgttcaatactggagcgaggaagg
ctgcgcaatcccaaggtggcagtgctctggctggaggccatccgcgtagagctgcgtgcc
gggcttaaggagattgccagcaccatgatggcgcgtgccctgcaggagtgtcccaatgcc
ggcgagctgtgggcagaggccatcttcatggaaacgaagccacagcgcaagaccaaatcg
gtggatgcactcaagaaatgcgaacacgatccgcacgtactgttggcggtgtccaagctg
ttctggtcggagcacaagttctccaaatgtagggattggttcaatcggacggtaaaaatt
gatccggatctgggcgatgcctgggcatatttctacaaatttgagctgttgcatggcacg
gaacaacagcagcaggaggtgctcgagcgttgcattgccgcggagcccacgcacggcgaa
tcatggtgcagtgtgagcaagtgcatccgcaactggcagttcaaaacgccagacgtgcta
cgtgccgtggtcagggagctgtctgtaccaatttaa
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