Drosophila virilis: 6624830
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Entry
6624830 CDS
T01066
Symbol
pds5
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dvi03036
]
6624830 (pds5)
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6624830 (pds5)
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
6624830 (pds5)
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
6624830 (pds5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
6624830
NCBI-ProteinID:
XP_002049569
UniProt:
B4LKV8
LinkDB
All DBs
Position
5:17682386..17688220
Genome browser
AA seq
1220 aa
AA seq
DB search
MADIVYPNGCRPLVEDLGTDELIRRLKTLANVLQTMDQDDNLHQQYIPLALHLLDDFFMQ
HQSRDVQLLIACCIADVLRVYAPEAPYKEQDQIKAIFKFFIKQLHGLKDPRDPSFKRYFY
LLENLAFVKSFNMCFELEDCQEIFHELFSTVFKIINDQHSVKVKNFFLDVLSPLITEADN
LSVELLDLILINIVEPNKSTNKYAHELTEQLLVKTGDAFEATIKLFFNRSLVMDKPNNKL
AITSKIYDIIYELNQINSDLLVSVLPQLENKLLSTDDAERLRATTLLARMFSEKDSQLSK
KYPSLLRTFFGRFCDITEPVRVKCVQSSMHFLLNHPHLQSEITEKLRMRHHDLDELVRHE
VVMAIVETGKRNFDIVVKSPELLEIVRERTMDKKYKIRRDAMNGLGYIYKRAICEPNDLS
SEVKQQVDWIKNKIMHGYYKLCLEDKLMVERLLITCLVPYKLAPEERMKKLYHLLGDLDA
NATKAFVELQKNQMKSRHTVSDWIKLHHSKEFTPRVLSQLAAKQANIAKLLPDPLKASEF
ITQFSQHLRKDAQLLRCINIVLKRDVSCRECADTMSVLLKKLGAHVMTNLYYNTVKMLIE
RVASVMVDKESIGVLIGLIEQCIQGGEICNEIGISSDEAGERGLKLLSMLSYVFSAHFFT
DTSLRHLIALLSYEYEYVAPLVLKTLTHLGRYQPLIDDANPAILNELAPICKDFALMGTP
KQAKHAVRCIFVNSQSSSTATTDGGGSASTTTQTVHPIFNEIIEELRVKLAPNCEYQRTK
IVTLGHIALNMPQAFLTPIKNMIARRIVKELLIQEVPAQREHELPESDWCEQDELPPDTL
CKLDALKTMARWLLGLRSDEHAAQKTFRMLAAFVNQRGDLLAQNRLCGAEKSWLRLGAAC
AMLKVCEQKGVGDQYSAEQYLQLSQLMEDPVLEVREIFARKLHKGLGRSLPRNCLPLDFM
GYYVLSGKETNRKLQDQVRHYVEADVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAF
AIPVLVHDPSFTSHEDYVQLRKMEKCLRFILEPLMAKRESFVYGFYKQLLQLIKQREYSQ
STDKDRMQNNYKMWALCDLAMHIIDAKVGQCDGNSSAFSMPLALPEMYYKLPAVANFQNN
EIYIPLDVYTLGAKTSKASATTTTATSHATAAGSKRAAALAIMDDDNSQENNLFDNIRAA
DTTEPMTKRTRGGAAAPAKS
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcggatattgtttatcccaacggctgtcggccgttggttgaggatctgggcacagat
gagcttatacgtcgccttaagacattggccaatgtgctgcagacaatggatcaggacgac
aatttgcatcagcagtatatacctctagccttgcacctactcgatgatttttttatgcag
catcagtcgcgggatgtccagttgcttattgcatgctgcatagctgatgtgttgcgtgtt
tatgcgcccgaagcgccctacaaggaacaggatcaaatcaaagcgatttttaagtttttc
atcaagcaactccatggtctgaaggatccgcgtgatccctcgttcaagcgttatttttac
ttgctagaaaacctggcctttgtcaagtcatttaatatgtgcttcgagctggaggactgt
caggaaatatttcatgaactctttagcaccgtttttaagatcatcaatgatcagcacagc
gtgaaagtgaagaactttttccttgatgtgctgagtccgctgataaccgaggcagataat
ttgtctgtcgagcttttggatcttatacttatcaacattgtggagccgaacaagtctacc
aacaagtatgctcacgagctaactgaacagctactggtcaaaacgggcgatgccttcgag
gcaaccatcaaattgttcttcaatcgttcgttggtcatggacaagccgaataacaagctt
gccatcacgagcaagatttatgatatcatctatgagcttaaccaaatcaacagtgatctg
ctggtttcggtgctgccgcaactggaaaataagcttctctccaccgacgatgccgagcga
ttgagagccacaacactgctggcacgcatgttctcagagaaggactcacaattgtcaaag
aagtatccatcgcttttgcgtacgtttttcggtcgattttgtgacattactgagcctgtg
cgcgttaaatgcgttcaatcttcaatgcattttctactcaatcatccgcacctgcagtca
gaaataaccgaaaagcttcgcatgcgtcatcacgatctggacgagctggtgcgccatgag
gttgtgatggccattgtggaaacaggcaaacgaaattttgacattgttgtcaaatcgccg
gaactcttagaaattgtgcgcgaacgcacaatggacaagaaatacaaaatacgtcgtgat
gctatgaacggtttgggctacatatataagcgcgcaatttgcgagccaaacgacctaagt
tcagaggtgaaacagcaggtggattggataaagaacaaaatcatgcatggctactataag
ctttgcctggaggacaaactgatggtcgaacggctgctcatcacctgtctggtgccgtat
aaactggcgcctgaggagcgaatgaagaagctatatcatttgttgggtgatttggatgca
aatgcgaccaaggcgtttgtcgagctgcaaaaaaatcagatgaaatcacgccacactgtt
agcgattggataaagttgcatcactccaaggaatttacaccacgcgtgctcagccaattg
gccgccaaacaggccaatattgccaaattgctgccggatccgttgaaggctagtgagttt
atcacacagttcagtcaacatctgcgcaaggatgcgcagctgctgcgctgcattaacatt
gttctcaaacgcgatgtcagttgtcgcgagtgcgccgacacaatgagcgtgctgctcaag
aaactaggcgctcatgttatgactaatctttattataacacagtcaagatgctcatcgaa
cgagtggcgtccgtcatggtggacaaggagtcaattggagtgctgatcggcttgatcgag
cagtgcattcagggcggtgaaatttgcaacgagattggaatatcatcagacgaagcaggc
gaacgcggcttgaagttgttaagcatgctatcgtatgtcttttcggcccatttctttacg
gatacctcactgcgacatctaattgctctactaagttatgagtacgaatatgtggcaccg
ttggtgctgaaaacgctgacgcatttaggtcgttatcagccgcttatcgacgatgccaat
ccggctatactgaacgaactggcgcccatctgcaaggactttgcgctgatgggtacgccc
aagcaggcaaaacatgcggtacgctgtatatttgtcaatagtcaatcatcatcgacggcc
acgacggatggcggcggcagtgcctcaactacaacccaaacggtgcatcccatttttaat
gagatcattgaggaactgagggttaaactggcgcccaattgtgaatatcaacgcaccaag
attgtcacattgggacacattgcgctcaacatgccgcaggcattcctaacacccataaag
aacatgattgcccgtagaattgtcaaggagcttctcattcaggaagttccggcgcaacgc
gaacatgaactgcccgaaagtgattggtgcgagcaggatgaactgccgcccgatacactc
tgcaagctggatgctcttaagacaatggcgcgttggctacttggcttacgttcggatgag
catgcagctcagaaaaccttccgcatgcttgcagcttttgttaatcagcgcggcgatttg
cttgctcagaatcgactgtgtggtgccgagaagtcctggttgcgtctcggcgcagcctgc
gcaatgctcaaggtgtgcgaacagaagggtgttggcgatcaatatagtgccgagcagtat
ttacagctttcccaactaatggaggatccggtgctggaagtgcgtgaaatatttgctcga
aaattgcataagggcttgggcaggagtcttccgcggaattgcttgcccctggactttatg
ggttactatgtgcttagcggcaaggagaccaatagaaaattgcaagaccaggtccgacat
tatgtggaagcggatgtgaataaacgacgagaatatcttaagactgtggccatgacgtca
ccagacagttctacggaatcgcaatcgctgcatattttacctgactacatgctggccttt
gccataccggtgctggtgcacgatcccagcttcacgagccacgaggactatgtgcagctg
cgcaagatggagaagtgtttgcgtttcatattggaaccgctgatggcaaaacgcgagtca
tttgtctatggcttctacaaacagttgctgcagctgatcaaacagcgcgagtatagccaa
agcacagacaaggatagaatgcaaaacaattataaaatgtgggcgctctgtgatctcgcc
atgcacataatcgatgctaaagttggtcaatgtgatggcaattcgagcgcattctcaatg
ccactggcgctgcctgaaatgtactataaactgcccgccgttgcaaatttccagaataat
gaaatctatataccgttggacgtatacaccctgggcgccaagacaagtaaagcctctgcg
acgacgacaacggctacgtcacatgcaactgctgctggttctaaacgggctgcagcgttg
gcaattatggatgatgacaattcacaggagaacaatctatttgataacatacgtgccgca
gacacaacggagccaatgactaagcgaacgcgcggcggtgccgcagcgcccgccaaatcg
tag
DBGET
integrated database retrieval system
