Drosophila virilis: 6625421
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Entry
6625421 CDS
T01066
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6625421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6625421
03009 Ribosome biogenesis [BR:
dvi03009
]
6625421
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6625421
Spliceosome [BR:
dvi03041
]
Complex A
U2 snRNP components
U2 related factors
6625421
Complex B
6625421
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
6625421
Ribosome biogenesis [BR:
dvi03009
]
Eukaryotic type
90S particles
Helicases
6625421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ABC_tran
AAA_25
T2SSE
AAA_30
AAA_7
ATPase
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
6625421
NCBI-ProteinID:
XP_002049783
FlyBase:
FBgn0208898
UniProt:
B4LM98
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MSKRRIEVGETYSSKAKKELEASTSASAAAASAAGTVAQILGGFVPSKQPPTINPFTRKP
YSARYQNLYKKRITLPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFAVSKG
RKGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSPQTLLKYMTDGMLLRE
AMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYF
DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEE
ACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVSTNIA
ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRL
YTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN
YLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPN
EAKKVADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQL
ARIMDRFSLKRTSTDFTSKDYYVNIRKALVQGFFMQVAHLERIGHYLTIKDNQNVQLHPS
TCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSLAPQYYDLNNFPQCEAKRQLELLQ
QRMETKQYQKGF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacgtattgaagtgggtgaaacgtactccagcaaggcaaagaaagaatta
gaggcttctacatcggcatcagcagcggcagcttctgcggccggcacggtcgcccaaata
ttgggtggctttgtgcccagcaagcagccgccgacaatcaatcccttcacaagaaagcct
tactcagcgcgctatcaaaacttgtacaaaaagcgcatcacactgccggtttttgagtac
caggcggactttatgcgtctgctcagtcagcatcagtgcatcgtcctggtgggcgagacg
ggctctggcaaaacaacacagatacctcaatggtgcgtggattttgcggtctccaaagga
cgcaagggtgtctcctgcacacagcctcgacgtgtggctgccatgtctgtggctcagcgc
gtatccgaagaaatggacgttaatctgggcgaggaagtcggctactcaatccgttttgag
gattgctcttcgccccaaacgctgcttaagtatatgacagatggtatgctgttgcgtgaa
gctatgtcggatcccatgctggatcaatatcaggttatactgcttgatgaggcgcacgaa
cgcacactggctaccgatatactgatgggcgtactaaaagaggttattcgccagcgtaat
gatctgaaattagtggtcatgtcagccactcttgatgcaggcaaattccagcagtacttt
gacaatgcgccgctcatgaacgtgcccggtcgcacacatcccgtggagattttctatacc
cctgagcccgagagagactatttggaggcagcaatacgcacagtcattcagattcatatg
tgcgaggaaattgaaggcgacattcttatgttcctcacaggccaggaagaaatcgaggag
gcatgcaagcgcataaagcgcgaaattgacaatctaggctccgaaattggcgaactcaag
tgcatacctttgtactcgacgctgccaccgaatctgcaacagcgcatttttgaagcggcg
ccgccaccaaatgcgaacggtgccattggtcgcaaggttgtggtgtctacaaacattgcc
gaaacttctctcactattgatggcgttgtatttgtcattgatcctggcttcgccaagcag
aaggtctataacccacgcatacgtgtcgagagtttgctcgtctcgccgatatcaaaggct
tcagcacaacagcgtgcgggtcgtgcaggccgcacacgtccaggcaaatgtttccgcctc
tacacggaaaaggcgttcaaaaacgaaatgcaggacaacacatatcccgagattttgcgg
tctaatttgggtactgtggtgctgcagctcaagaaactgggcattgatgacttggtgcac
tttgactttatggacccgccagctcccgagacgctcatgcgtgccttagagttgctcaac
tacttggccgccctcgacgatgatggcaatctgacagacctgggtgctgtcatgtccgag
tttccactggacccacaattggccaagatgctgatagcgagttgtcaacacaattgttcc
aatgagatactctcaattacggctatgctgtcggtgccacaatgtttcgtgcgacccaat
gaggcaaagaaggtggccgacgaggccaagatgcgcttcgctcatatcgacggggatcat
ctaacgttgctgaacgtctaccacgccttcaaacagagcagcgaagatccgaactggtgc
tacgagaactttatcaacttcaggtcgctgaagagcgccgacaatgtgcgacagcagctg
gcgcgtatcatggatcgctttagcttgaagcgcaccagtacagatttcacctctaaggac
tactatgtcaatatacgcaaggccctcgtacagggcttttttatgcaggttgcgcatctg
gagcggattggacactatctgaccatcaaggataaccagaacgtgcagctgcatccttca
acgtgtctggaccacaagcccgactgggtcatctacaatgagtttgtgttgaccaccaag
aactacatacgcactgtgacagatgtgaagcccgaatggttgctcagtctggcgccccag
tactatgatctgaacaactttccacaatgcgaggccaagcgccagctggagctgcttcag
cagcgcatggaaaccaagcagtatcagaagggtttctga
DBGET
integrated database retrieval system
