Drosophila virilis: 6625623
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Entry
6625623 CDS
T01066
Symbol
LS2
Name
(RefSeq) splicing factor U2AF 50 kDa subunit
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6625623 (LS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6625623 (LS2)
Spliceosome [BR:
dvi03041
]
Complex A
U2 snRNP components
U2 related factors
6625623 (LS2)
Complex B
6625623 (LS2)
SSDB
Ortholog
Paralog
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Motif
Pfam:
RRM_1
RRM_MUD2_C
DUF8489
DUF8400
RRM_7
RRM_9
Motif
Other DBs
NCBI-GeneID:
6625623
NCBI-ProteinID:
XP_002049047
UniProt:
B4LPK2
LinkDB
All DBs
Position
5:23303348..23304740
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AA seq
428 aa
AA seq
DB search
MGRGRKEKHQSRSRNRRSRSRSHSKHRPTRSSSITSQPIQVKRRKERINSSWDIPPMGYE
HLSPVQYKAMQASGQIASRIVPDAPPTGESAAIATVTRQARRLYVGNIPFSTTDEDMMAF
FNEQIHRLNGTQGHDGNAVLTCQTNLDKNFAFLEFRSMDEATQAITFDGISYRGQTLKIR
RPHDYHPVASITTAEIVEIAKGATQIHASNLPISPVVPDSPHKIYIGGLPTCLNEEQVKE
LLVTFGQLRGFNLVKDTITGQSKGFAFCEYLDPSITEQAIAGLNGMQLGDRKLVVQRSIA
GVRNMVASQLPVLQVPGFPIDVSTCKATEVLCLLNMVLPSELLDNDEYEDIRTDIKQECA
KYGKVKSLKIPRPIGDPPQTGCGKVFVRFESIEDCKKALNALSGRKFSGRIVMTSFYDLD
KYKRKDFH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtggtcgcaaagaaaagcatcaatcacgtagtcgcaatcgaagatctcgttcc
cgttcgcattccaagcatcgtccgacacgctccagttccataacaagtcaaccgatccag
gtaaagcgccgcaaggagcgcattaactcctcatgggatataccaccgatgggttatgag
catctctcgcccgtacagtacaaggcgatgcaggcaagtggccagattgcctctagaatt
gtgccggacgcaccgcccacgggtgagtcggcggccattgcgacggtaacgcgacaggcc
cgtcggctgtatgtgggcaatattcccttcagcactaccgacgaggatatgatggcgttt
tttaatgagcagatccaccgtttgaatggaacacagggtcacgatggcaacgccgtgctc
acctgccagacgaatctagacaagaattttgcgtttctcgagttccgttccatggatgaa
gcaacccaggccattacctttgacggtattagctatcgtggccagacactcaagatacga
cgaccgcatgactatcatccggttgcctcaataaccaccgcggaaatagttgaaatagcc
aagggagcgacgcaaatccatgccagcaatctacccatttcaccagtggtgccagattcg
ccgcataaaatttacattggtggtttgcccacctgtttgaacgaggagcaagtgaaagag
ctgctggtgacctttggccagctgcggggatttaatctggtgaaggataccatcacgggc
cagagcaagggtttcgccttttgcgaatatctagatccgtccattacggaacaagccatt
gccggtctcaatggcatgcagctaggtgatcgaaagcttgtagtgcagcgctccattgcc
ggcgtacggaacatggtggccagtcagttacccgtgctgcaggtgcctggttttcccatc
gatgtctccacttgcaaggccaccgaggtgctatgcctgctgaacatggtgctgccaagt
gagctgctggacaatgatgagtatgaggacatacgcacggatattaagcaggaatgtgcc
aaatatggcaaagtgaaaagtcttaaaattccacgtccgattggcgatccaccccaaacc
ggctgtggcaaggttttcgtgcgcttcgagtcgatcgaagactgtaagaaggcactgaac
gcattgagtggccgcaagtttagcggacgcattgtgatgacatccttctacgatctagac
aaatacaaacgcaaagattttcattaa
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