Drosophila virilis: 6626317
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Entry
6626317 CDS
T01066
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6626317 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6626317 (fand)
03041 Spliceosome [BR:
dvi03041
]
6626317 (fand)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
6626317 (fand)
Spliceosome [BR:
dvi03041
]
Complex B
Other components
Prp19-related factors
6626317 (fand)
Complex C
6626317 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_15
Mad3_BUB1_I
TPR_12
TPR_8
ARM_TT21_C
PPR
RPN7
ORC1_wHTH
TPR_10
Motif
Other DBs
NCBI-GeneID:
6626317
NCBI-ProteinID:
XP_002049524
UniProt:
B4LKJ6
LinkDB
All DBs
Position
5:complement(18259558..18262622)
Genome browser
AA seq
884 aa
AA seq
DB search
MAEKTTQALQIELNFDEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNLVYERALK
ELPGSYKIWYNYLRTRRKQVRGKIPTDPMYEQVNNTFERALVFMHKMPRIWMDYGVFMSS
QCRITRTRHVFDRALRALPITQHGRIWPLYLKFVQRYEMPETALRVYRRYLKLFPEDAEE
YVAYLQEAERLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDMISKHPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVANDEYANEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVKLYEDKPEDIINTYTEAVQTVQPKQAVGQLHTLWVEFAKFYEANGQVEDARVVFERG
TQVEYVKVEHLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKVAYHDETETVQMRLY
KSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGLFLEEHNYYEEAYRAY
EKGIALFKWPNVYDIWNSYLTKFLERYGGTKLERARDLFEQCLDQCPPEHAKYFYLLYAK
LEEEHGLARHAMAVYDRATSAVKEDEMFDMYNIFIKKAAEIYGLPRTREIYEKAIEALPE
QNMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNTTNGAAADAGAGPGTSSDAMRLLEEKARQAASEA
KQKPVEKAASNIMFVRGETQGGAKGKENTVINPDEIDIGDSDEDEEDEAEDAGTEHAPEG
DTAAATKTDDEGLIMKKLRFEQKAIPAKVFGSLKPNNQQDSDEE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaacaacacaagcactgcaaatcgagctgaattttgatgaagaggatgtg
ccgtatgaggaggagattctacgcaatgcctattccgtcaagcactggctgcgctacatc
gatcacaaggccaaggcgcccaataatggcgttaatttggtatacgagcgcgcattaaag
gagctgcccggcagctacaagatctggtacaactatttgcgtacgcgcaggaagcaggtg
cggggcaaaatacccacagatcccatgtacgagcaagtgaacaacacattcgaacgggcg
ctcgtcttcatgcacaagatgccacgcatctggatggactatggggtgttcatgagctca
cagtgccgcataacgcgtacgcgtcacgtttttgatcgtgctctgcgcgcgttgcccata
acgcagcacggacgcatctggccactgtatctgaagtttgtgcagcgctacgagatgccc
gaaacggcgctgcgtgtttacaggcgctatctgaagctgtttcccgaggatgccgaggag
tatgtggcctacttgcaggaggcagagcgtctggatgaggctgcacagcaactggcgcac
attgttgacaatgagcactttgtctcaaagcacggcaagtcgaatcatcagctgtggaac
gagctctgcgatatgatatcaaagcatccgcacaaggtgcattcactgaatgtggatgcg
atcattcgtggtggcctgcgtcgttacacggatcagttgggccacctttggaactccctg
gccgattactatgtccgctccggtttgtttgatcgtgcccgtgacatctatgaggaggcc
atacaaacggtgaccacggtgcgagacttcacccaagtctttgatgagtatgcgcagttt
gaggagttgtcattgaacaagcgcatggagcaggtggcgaatgatgagtacgcaaacgag
gaggatgacattgatgtagagctgcgtctctcacgcttcgagtatctgatggagcgccgt
ctgctgctgctcaacagcgtgctgctacgccagaatccacataatgtgcatgagtggcac
aagcgggtgaaactatatgaggataagccggaggatatcatcaacacatatacggaagca
gtgcagacggtgcagccaaagcaggcagtgggtcagctgcacacgttatgggtggagttc
gccaagttctatgaggccaacgggcaggtggaggatgcacgtgtggtctttgagcgtggc
acgcaagtggaatacgttaaagtggagcacttggcggccgtgtggtgcgaatgggccgaa
atggagctgcgtcagcagcagttcgaagcagcgctcaagttgatgcagcgcgccacggcc
atgcctaagcgaaaggttgcctatcatgatgagacggaaacggtgcaaatgcgtctttat
aaatctctaaaagtgtggtccatgtacgctgacctggaagaatcctttggcactttcaag
acctgcaaggcggtctatgaacgcatcattgacctcaagatttgcacgccgcaaataatc
atcaattacggcctcttcctggaagagcacaattactatgaggaggcgtatcgcgcctac
gaaaagggcattgcgctgttcaaatggccgaatgtctatgacatatggaattcctatcta
accaagtttctggaacgctatggcggcaccaagctggagcgtgcacgtgatctttttgag
cagtgcctggatcagtgtccgccagagcatgccaagtatttctatttgctgtatgccaag
ctcgaggaggagcatggactggcgcgtcacgccatggctgtttacgatcgcgccaccagc
gctgttaaagaggacgagatgtttgacatgtacaacatattcatcaaaaaagcagccgaa
atttatggactaccgcgcacacgtgagatctatgaaaaggccatcgaggcgctgccagag
cagaacatgcggcacatgtgcgtcaagtttgcggagctggagaccaaacttggcgaggtg
gatcgtgccagggccatctatgcgcattgctcacaggtttgcgatccgcgtattaccgcc
gacttttggcaaacatggaaggagtttgaggtgcgtcatggcaacgaggacaccatgcgt
gaaatgctacgcattaagcgctctgtgcaggccacctacaacactcaggtcaacatgatg
gctgcccagtttctcaatacgaccaatggcgctgccgccgatgcgggcgccggcccaggc
actagctccgatgccatgcgcttgctggaggagaaggcgcgacaggcggcatcggaggcc
aaacagaagccagtcgagaaggctgcgtccaatattatgtttgtgcgcggcgagacgcaa
ggcggtgccaagggcaaggagaatactgtcatcaatcccgatgagattgacattggcgac
agcgatgaggacgaagaagatgaggcagaagacgctggcactgaacatgccccagaaggc
gacacggctgcagccaccaaaaccgatgatgagggtctcatcatgaagaagctgcgtttc
gaacagaaagccattcctgccaaggtcttcggcagtcttaaacccaacaatcaacaagac
tccgatgaggaataa
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