Drosophila virilis: 6626326
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Entry
6626326 CDS
T01066
Symbol
pea
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6626326 (pea)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6626326 (pea)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6626326 (pea)
Spliceosome [BR:
dvi03041
]
Complex C
Other components
Step II factors
6626326 (pea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA
Motif
Other DBs
NCBI-GeneID:
6626326
NCBI-ProteinID:
XP_002048940
UniProt:
B4LNR3
LinkDB
All DBs
Position
5:24510243..24514367
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AA seq
1267 aa
AA seq
DB search
MDELQQLEYLSLVSKICTELDNHLGINDKDLAEFIIDLEHKHRSYDAFRKALLENGAEFP
DSLVQNLQRIINLMRPSRAGGDSKAMNGKDSNSKGDKQSQLIKMFPGLALPNDKFSSKLS
EEDDEKEDQGVKEPKQKKNEMSDVDAAMLELEALAPGDGQEQRDGKESRRRQRSSSRERI
KRKERSRSRDKERDRDRQRDKDRSRDSHRDKERERDSNRDRDSNRNKERDRDSNRDKERR
RRRSRSREDRDRDRDRRRRRSSSREPHHDRHEQRRRRSRSRSRERSSRQPQDKMPPPAAV
MSDDPELGKIYSGKVANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVARNQ
TVKVKVMSLTGQKVSLSMKEVDQESGRDLNPLSHAPEEDAVSLRDRNPDGPYSSTSSMLN
LQGNNIDGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPKDEDDEA
DIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQRE
QEMEALPSNLNKNWIDPLPEDDSSRHLAANMRGMGAAPQEVPEWKKHVIGGKKSSFGKKT
DLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIG
CTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMEA
ELKTYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFEAPI
FTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILY
ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYV
VDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLP
TPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLT
RLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAK
FNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVV
SAGKNSVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHEL
VQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRIS
RVRRRRN
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctgcagcagctggagtacctgtcgctggtatcgaaaatctgcacagagctg
gacaatcacttgggcatcaatgacaaggacctggccgaatttatcatcgatctggagcac
aagcatcgcagctacgatgcgtttcgcaaggcgctcctggaaaatggcgccgaatttccc
gattcgcttgtgcagaatttacagcgcataattaatttaatgcggcccagtcgtgctggc
ggcgattcaaaggcaatgaatggaaaggacagtaacagcaaaggggacaaacaatcgcag
ctaatcaaaatgtttcccgggttagctttgcctaatgacaaatttagtagcaagctgtcg
gaggaggatgatgagaaagaggaccagggtgtcaaagagcccaaacagaaaaagaacgaa
atgagtgacgtggatgcggccatgctggaactggaggctctggcaccaggcgacggccaa
gagcagagagatggcaaggagagcaggcggcgacaacgatccagctcacgtgagcggatt
aaacgcaaagagcgcagtcggagtcgtgacaaggagcgggatagggacaggcagagagat
aaggatcggagtagggatagccatcgggataaggagcgggaaagggatagcaatcgggat
agggacagcaatcggaataaggagcgggatagggatagcaatcgggataaggagcgtcgt
cgcaggcggagcagatcccgggaggatcgagatcgggatcgtgatcgtcgcaggcgtcgt
tccagctcacgggagccgcatcacgacagacacgaacaacgaagacgacgctctcgttct
cgctcccgcgaacgcagtagccgccagccgcaggataaaatgccgccgccggcagctgta
atgagcgatgatcccgagctgggaaaaatctattccggcaaggtggccaacatagtgcca
tttggttgcttcgtgcagctgtttgggctgcgcaagcgctgggagggtttggtgcacatc
tcgcagcttcgcgccgagggacgcgtcaccgatgtgaccgaggtggtggcccgtaatcag
acggtcaaagttaaagtcatgtcgctgacgggccaaaaggtttcactttccatgaaggaa
gtggaccaggagagcggacgcgatctcaatccgctatcgcatgcaccagaggaggatgcg
gtgtctttgcgtgatcgcaatcctgatggaccctacagcagcacatcatccatgctcaat
ctgcagggcaataacattgatggcgatgagcacgagtcccgcaagcgcgtcacacgtatc
tccagtccggagcgttgggagattaagcaaatgattagctccggtgttctggatcgcagc
gaaatgcccgactttgatgaagagacgggcctgctgcccaaggacgaggacgacgaggcg
gacattgaaatagaaattgtagaagaggagccaccgttcctttccggtcatggacgtgca
ctgcacgatctgtcgcccgtgcgcatagtcaaaaatccggatggctctcttgcccaggca
gccatgatgcagtcagcgttgtccaaggagcggcgcgagcagaaaatgctgcagcgagaa
caggaaatggaagctctgcccagcaatctcaacaagaactggatcgatccactgccagag
gatgacagctcacgccatctggcggccaatatgcgcggcatgggcgccgcaccccaggag
gtgcccgaatggaagaagcatgtgattggtggcaagaagtcctcctttggcaagaaaacg
gatctgacgctcgtcgagcagcgccaatcgctgcccatttacaagctgcgcgacgatctc
ataaaggccgtcacggacaaccagatactgattgtcattggcgaaacgggttccggcaag
accacacagattacccagtatttgggcgaatgcggcttcacggcacgaggcaaaattggc
tgcacgcagccgcgtcgtgtggccgccatgtccgtggcaaagcgtgtggccgaggagtac
ggctgtcgccttggccaggaggtgggctatacgatacgtttcgaggattgcaccagtccc
gagacggtcatcaagtacatgacagacggcatgttgttgcgcgagtgcctcatggaggcg
gagctgaaaacctactcggtcatcatgttggacgaggcgcacgagcgcacaatacacacg
gatgtgctcttcggtctgctaaagaccgccgtgcagaagcggccggaattgaagctaatt
gtcacctcggcaacgctggatgcggtcaagttttcgcagtacttcttcgaggcgcctatt
tttacaatacccggacgcacgtttcctgtggaggtgctgtacaccaaggagccggagacg
gactacttggatgcttcgctaataactgtcatgcaaatccatttgcgtgaaccaccaggg
gacatactgctcttcttaacgggtcaggaggagattgacacagcctgcgaaatactctac
gagcgcatgaagagcctgggaccagatgtgccggagctgatcatattgcccgtgtactcg
gcgctgccctctgagatgcagactcgcatctttgatccagcgcccgccggcagtcgcaaa
gtggtgattgccacaaatatagcggaaacatcgctcacaatcgatggcatcttctatgtt
gttgatcccggctttgtaaaacaaaaggtctacaactccaagacgggcatggactcgctg
gtggtcacgcccatttcgcaggcagccgccaagcagcgtgccggccgtgcgggccgcact
ggacccggcaaatgctatcgcctctacacggagcgtgcgtatcgggatgagatgctgcca
acgccagtgccggagatccagcgcaccaatctggctaccacagtactccagttgaagacg
atgggcatcaacgatttgctgcactttgatttcatggatgcgccgccagtggagtcgctg
gtcatggccttggagcagctgcactcgctctccgcgctagatgatgagggtttgttgacg
cgtctcggtcgccggatggccgagtttccgctggagccaaatctttccaaaatgctcatc
atgtccgtggcgctacaatgctctgacgagatcctaacaattgtgtccatgctcagcgta
cagaacgtgttctacaggcccaaggacaagcaggcgctggccgatcaaaagaaggccaag
ttcaaccaggcggaaggtgaccatctgacgctgctggccgtttacaacagctggaagaac
aacaagttctcgaatgcctggtgctatgaaaactttgtgcaaatccgtacgctgaaacgt
tcgcaagatgtgcgcaaacagctgctgggcatcatggatcgccacaagctggacgtggtg
tctgcgggcaagaactcggtgcgcatacagaaggccgtctgctcgggcttctttcggaat
gcggccaaaaaggatccgcaagagggctatcgcaccctggtcgattctcaagtggtctat
atacatccatcgagcgcgcttttcaatcgtcagcccgagtgggtcatctaccatgagctg
gtgcagacgacgaaggagtatatgcgcgaggtgaccacaattgatcccaaatggctggta
gaatttgcgccatcgttcttccgcttctcggatcccaccaagctcagcaaattcaagaaa
aaccaacggctagagccgctctacaacaaatacgaagagccaaatgcttggcgtatttcg
cgcgtgcggcgacgccgcaattaa
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