Drosophila virilis: 6626557
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Entry
6626557 CDS
T01066
Symbol
Isha
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6626557 (Isha)
03041 Spliceosome [BR:
dvi03041
]
6626557 (Isha)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6626557 (Isha)
Spliceosome [BR:
dvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
6626557 (Isha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
6626557
NCBI-ProteinID:
XP_002049807
UniProt:
B4LMQ9
LinkDB
All DBs
Position
5:complement(15331925..15339997)
Genome browser
AA seq
1346 aa
AA seq
DB search
MNMETVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEY
KVPGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQ
KNNVFKSDVIQPIFDLADPNHPIYHQMPPIVGPGNLNTGPGPSGSSGALNLSDISSNNAA
NGLNTSGMSNMDLSSATDDKLGGAMPDLSLSHEKCSSSSRRHMEQHYMKRQQHQHSMASS
VSIVSKSRFDSVGPSKSHHHKYVKSSSSHELEYDVREIIDDEDGDMLMGEDHHCMGDDSP
PGSSNLLDNNNLKQLLNDPNVLRQLQTLQNFQKFKQQEENQKHRYQDEALQQHLQNVLKG
TAGMPPGVAMGMGGHNDVTDMNKDVEFISEQQPIEVINLDGADSRSPTPDRDRYKRSRRS
SRSRSPRNRGGGGGGGGGGNANDRDRGSRRRSSRSRSRSPRSSRRRGSRDRDRMERSTRD
KERDREHERERRKKGLPDIKKDHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQ
IVPRGCAFIVMNRRQDAHKAMQALKNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVT
YVPWSKLSPDTDFDSLEEGGMFDEDTMPSWMKQKINQAKNVKENKSTVPTADLTTAPPVA
PPNLLFGIDTTQPPPVAPPQHGGPGAPPPALMGMVPGQFQMAPPLAGPPPQRMMGPMGPM
NHPLGGMPMPPNMVPGMPPPMMMPPNMMPPGFPSMGGPPPHPLGLPPGAQFPPPGAVPPP
MATIPTPAVSGAGNVSDDQMDIEMELEDAPQSVPPPSQQQQQQQPPNFSQPPPIFAGGSA
PPNSAEVAAAVAANELFQRERTRGPGGGSRWGGRDDIGETSDRWRNENGAGGPPPLSGAF
TEARARLNLNSLEHGGIPRPEFMAGLDFDNRTGGGPRGMGPGPRGGNHNGGNGGGDFFQP
NMNPNRFNQPTSLMQMRILPPAAFNQRMGGPGTGNGVGPMFMRNQGGGPGGRQQGPGFFN
PRNPFNDNQRGRGGGNGGGGGRGMGGSGGGGGGRGGRWSDEEDDNGINNNNSNFKRRGGG
GPGGPGNRFRGDRDSDDRRGGNARGGRGGPRSEERERAPNNNNRRGSRDDSNRHSISSTD
ENALQGKQSSLEADDFKNKSVAAPSVNNVAKSAVVDTEEDWDRELQEYDARMEAQQAAES
AAAAAAAEAAAAAAAAAAGDTAVAAAAAEDSQQAETMTETEAFARPVLQESSEASKPKAP
SPVCTPLYDELPPPLSAASAAAPPPQQDEQPEEPQPKIEQRVTEEIAPTPATPQPEAAPA
AEIESTKEITEAEPVASAQPEVETDT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagacggtcgtcgctttcaataatgagctctccgggctctatgatagccgg
ccgcccatatcaaaggctaaaatggccgccatcacaaagtcggcaatgcgtgcaatcaaa
ttctacaagcatgttgtgcagagtgtcgaaaagtttatactcaaatgcaagccggagtac
aaagtgccgggcttgtatgtcatagactcgattgtgcgacagtcgcggcatcagtacgga
accgaaaaggacgtatttgcgccacgctttcagcgcaatctgaccgaaacgtttgccaat
ctcttccgatgcgcgcccgaggataagagtcgcatcatacgcgttttaaacctttggcaa
aagaacaatgtcttcaaatcggacgttatacagccaatattcgacttggccgacccgaat
catcccatttatcaccaaatgccgccaatcgtcggaccgggcaacctcaacacaggccca
gggcccagcggcagcagtggtgctctaaatctgtcggatatttccagtaacaatgctgcc
aacggccttaatacctctgggatgagcaatatggacctaagctctgctaccgacgacaaa
ttgggtggtgccatgccggatttgtcgctaagccatgagaagtgctcgagttccagccga
cgtcacatggagcagcattatatgaaacgccagcagcatcagcatagcatggcgtctagc
gtttctatcgtatcgaagagccgcttcgatagcgtgggccccagcaagtcgcatcaccac
aaatatgtcaaaagcagcagctcgcacgagctggaatacgatgtgcgtgaaataattgac
gatgaggatggtgacatgctgatgggtgaagatcatcattgtatgggcgacgactcgccg
cctggctcatcgaatttgctagataacaacaatttgaagcagctgctcaatgatcccaat
gtgctgcgccagctgcagacgctgcaaaactttcaaaaattcaagcagcaagaggagaac
caaaaacatcgctaccaggatgaagcactgcagcagcatttgcagaatgttcttaagggc
acagccggcatgccgccgggcgtagctatgggaatgggcggtcataacgatgtgacggat
atgaacaaggacgtggaattcatatcggaacagcaacccattgaggttatcaatctggat
ggtgccgattctcgtagtcccacgcccgaccgggaccgatacaagcgaagtcgacggagc
agccgcagtcggtcaccacgcaaccgtggtggcggcggcggcggcggtggcggtggcaat
gccaatgatcgtgaccgcggaagtcgccggcgcagctcccgctctcgtagccggtcgcca
cgttccagccgtaggcgcggatcgcgcgatcgtgaccgtatggagcgcagcacgcgcgac
aaggagcgtgatcgagagcatgaacgtgagcgtcgcaagaagggtctgcccgatataaag
aaggatcatctaagtgtgtgcagcaccacgttgtgggtgggccacctctcaaagctggta
tatcaggaggaattgtcggacacttttggcgagtatggcgatatcgtgagcatcgaccag
attgtgccaaggggttgcgcctttattgtgatgaatcgccgccaagatgcgcacaaggcc
atgcaagcgctaaagaatcacaagctgcaagggcgtgccattaccatatcatgggcagcc
ggcaagggtgtcaagagtaaggaatggaaggacttctgggacctcgagctcggcgtcaca
tatgtgccgtggagcaagctgagtcccgataccgactttgacagtcttgaggaaggcggc
atgtttgacgaggacaccatgcccagctggatgaagcagaaaataaatcaggcgaaaaat
gtcaaggaaaacaagtcgactgtcccaaccgctgacctcacaacggcgccgcctgtggcg
ccgccaaacttgctcttcggcattgacacaacacagccaccgccagtggcaccgccacag
catggcgggccgggggcgcctccgcctgctctgatgggcatggtgcctggccagtttcag
atggcgccgcctttggccggaccgccaccacagcgcatgatgggtccaatgggacccatg
aatcatccattgggcggcatgcccatgcctccaaatatggtgcccggtatgccaccgcca
atgatgatgccgcctaacatgatgccgcccggctttccgagcatgggcggtccgccgcca
catcccctgggactgccgccaggcgcgcagttccccccacccggtgctgtgccgccaccc
atggccacaattccaacacctgcggtctctggggctggcaatgtgagtgacgatcaaatg
gacatagaaatggaacttgaggatgcgccgcaatccgtcccgccgccatcacagcagcag
caacagcaacaaccaccgaactttagccagccgccgcctatttttgctggtggctcagcg
ccacccaacagtgccgaagtggctgcagcggtcgcagcaaatgaattgtttcagagggag
cgaacacgtggtcccggcggcggctcacgttggggtggccgcgatgacattggcgagacg
tcggatcgctggcgaaatgaaaacggcgcaggtggaccacctccgcttagcggagcgttc
actgaggctcgagcgcgccttaacctaaacagcttggagcatggtggcattccacgtcca
gaatttatggctggcttggactttgataatcgtactggcggtggcccacgtggcatggga
ccaggacctcgcggtgggaaccataatggcggcaacggcggcggtgacttcttccagccc
aatatgaatccgaatcgcttcaatcagccaacgagtctgatgcaaatgcgcatactgccg
ccagcggcgtttaatcagcgcatgggtggaccgggcacgggcaatggagtaggccccatg
tttatgcgcaatcaaggcggcgggccaggcggcagacagcaaggaccaggcttcttcaat
ccacgcaatccgtttaatgataaccagcggggtcgcggcggcggcaacggcggtggcgga
ggtcgtggcatgggtggcagtggaggtggaggtggaggtcgcggtggccgctggagtgat
gaagaggatgataacggcataaacaacaacaacagcaactttaaacgtcgtggaggcggt
ggcccaggtggccctggcaatcgattccgtggcgatcgagacagtgacgatcgtcgcgga
ggcaatgcacgtggcggacgaggtgggccgcgtagcgaagagcgtgaacgtgcgcccaac
aacaataacagacgtggctcgcgcgatgacagtaatcgtcactcaataagctccacggat
gagaacgcattgcaaggcaaacaatcttcattagaggcagatgattttaaaaataagtcg
gtggcagcgccatccgtgaataatgttgcgaaatcagccgtagtcgatacagaggaggat
tgggatagagagctgcaggaatacgacgcgagaatggaggcgcagcaagctgcggaaagc
gctgctgctgctgctgctgctgaagctgctgctgctgctgctgctgctgctgctggtgat
actgctgtagctgctgctgctgctgaagatagccagcaagcggaaacaatgaccgagacg
gaggcgtttgccagaccagttttgcaggagagcagcgaagcgtctaagccaaaggcgcca
tcacccgtctgcacgcccctctatgacgagttgccgccaccgttgtcagcagcttcagca
gcagcgccgccgcctcagcaagatgagcagccggaggagccgcagccaaagatcgaacag
cgggttactgaagaaattgcgccaacgccagcaacaccacagccggaagcagcgcccgcc
gcagagattgaatcaacgaaagagataacggaggctgagccagttgccagtgcccagcca
gaagtcgagacagacacatag
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