Drosophila virilis: 6626625
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Entry
6626625 CDS
T01066
Symbol
Polr1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6626625 (Polr1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6626625 (Polr1A)
Enzymes [BR:
dvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6626625 (Polr1A)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
6626625 (Polr1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
6626625
NCBI-ProteinID:
XP_002049701
UniProt:
B4LLN1
LinkDB
All DBs
Position
5:16242163..16247774
Genome browser
AA seq
1648 aa
AA seq
DB search
MGSRRPPDVHMFPSDLEFAVFTPEEIRKLSVVKVITGLTFDALGHPIPGGLYDIRLGSYG
RCTDPCGTCLKMQDCPGHMGHIELGSLVYNPFFIKLVQRLLCIFCLHCYKLQMKDHESEI
VMLQLRLIDAGYIIEAQELELFKSEIACQNTEELVKLDNGDAVHPHIAAVNELLAKNTSN
ASNVTKTSCSLRTAITHAALQRASSKKCRHCNKSMRFVRYLHRRLVYYVTIADLKERLGD
VPENSGQNKVIFADECRRYLRKIYENYPQLLKLLVPVLNMNNEASVTGDCSPVDIFFMDT
IPVTPPRARPMNVINDMMKGNPQTDIYVNIIENNHVLNVVLKFMKGQQEKLSEQAKAAYQ
NMRGANSHEKLYNAWLALQSSVDVLLDVNMSRDIKSAEGLKQVLEKKEGLIRKHMMGKRV
NYAARTVITPDPNIDVDEIGIPDIFARKLSYPVPVTEWNVIELRKMVMNGPEVHPGANYI
QDSKGLTTFIPADNAAKRASMAKLLLSNPKDGVKIVHRHVLNGDVLLLNRQPSLHKPSIM
AHKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARSEAYNLVNVASNYLVPK
DGTPLGGLIQDQVISGVKLSIRGRFFNREDYQQLVFQGLSHLKGDVKLLPPAIQKPAMLW
SGKQVLSTIIINLIPDGYEHINLDSFAKIGGKNWNVAKPRTPLCGSNPLEQELSESQVQI
RKGELLVGVLDKQQYGATTFGLIHCMYELYGGDVSTRLLTAFTKVFTFFLQLEGFTLGVK
DILVTDEADRRRRKIIRECRDVGNSAVAAALELEDVPPHDVLAEQMEAAYVKDSKFRVLL
DRKYKSLLDGYTNDINKTCLPGGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIEL
EGKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVK
TSRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNGKFCADFL
AQNAKAVLRPSQLQLMKDEECLAKVLRHEKHIRSWQKKQPAKLHAAFTHFSEELRNEVEV
KRPNEINAKTGRRRFDEGLLKLWKKADAEDKALYRKKYARCPDPTVAVYKQDNYYGAVSE
RTRQLIDDYALKHPSQKQIIADIMHMKSIKALASPGEPVGLIAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQQHNAEKLRISLNCVTLASLL
ESVHISTSLTMEPERAYVYDLHFKFLPRENYKEDYSVRPKRIIKYMQQTYFKQLIRAIIK
VSNAKKTSKIVVVDEKKESGNKQDEDNDLELDAADDVGTQKAQDNDDDSSDDGGDDDATG
IKLKQRKTDEKDYDDPDDVEEIIDANDDEEEPDEEDAFGNEPANDENAEVDDKSVEKLLS
NQMVQDYTYDKEHHLWCRVKLNLSVRYQKPDLTSIIRELAAKSIVHQVPHIKRAIIYKGN
DDEQLLKTDGINIGEMFQHNKILDLNRLYSNDIHAIARTYGIEAANQVIVKEVSNVFKVY
GITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESSLQFLRNAAGFGRPDE
LNSPSSRLMVGLPVRNGTGAFELLTKIC
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgagaaggcccccggatgtgcacatgtttccctcggacctggagttcgccgtg
tttacacccgaggagatacgaaaactgagtgtggtgaaagttataaccggcctcacattt
gatgccctgggacacccaatacctggtggtctatatgacatacgattgggatcctacggc
cgatgcacggatccctgcggcacatgcctaaagatgcaagattgtcccggccatatgggc
catattgagctgggctcactggtctacaacccgtttttcatcaaactggtgcaacgttta
ctctgcatattttgtctacactgctacaagcttcaaatgaaggatcatgagagcgaaatt
gttatgctgcagctgcgacttattgacgccggctacattattgaagcacaagagctggag
ctgtttaaatccgaaattgcctgccagaatacagaggagctggttaagctggataacggc
gacgctgtacatccgcacattgctgcggtcaacgagctgctggccaagaataccagcaat
gccagcaatgtgaccaagacaagctgctctttacgcacagcaattacgcacgcggctctg
cagcgagcctccagtaagaagtgcaggcactgcaacaagtccatgcgctttgtgcgctat
ttgcatcgccgccttgtatattatgtgaccattgccgatttgaaggaacggttgggtgat
gtgcccgaaaacagtggccagaacaaggtcatatttgcggatgaatgccgacgctatctg
cgaaagatatacgaaaattatccgcagctgctaaagctgttggtgcctgtgttgaacatg
aacaacgaggcaagcgtcaccggtgactgctcgccagtggatatcttctttatggacaca
ataccagttacaccgccgcgtgcgcgtcctatgaatgttattaacgacatgatgaagggc
aatccgcagacggatatctatgtgaacattatcgagaataatcatgtgctcaatgtagtg
ctaaagtttatgaagggccagcaggagaaacttagcgagcaggcaaaagctgcctaccaa
aacatgcgcggtgccaacagccacgagaagctctacaatgcatggctggcgctgcagagc
tccgtagatgtgttgcttgatgtaaacatgtcgcgagacatcaaatccgccgagggcctt
aagcaggtgctcgagaagaaggagggtctcatacgcaagcacatgatgggcaagcgcgtt
aattacgcagcacgtactgtcatcacgcccgatcccaacatcgatgtagatgagattggc
ataccggacatatttgcgcgcaaactctcttatccggtacccgtgactgaatggaatgtc
atcgagttgcgcaaaatggtcatgaatgggccagaagtgcacccgggtgccaattacata
caggacagcaaagggttgaccacctttatacccgccgacaatgcggccaaacgagccagc
atggccaagcttttgctgtccaatcccaaggacggcgtcaagattgtgcatcgccatgtt
ctgaatggagatgtactgctgctcaatcgtcagccttcgctgcacaagccatccataatg
gcgcataaggcgcgcatattgcacggcgagaaaacgtttcgcctccactactccaattgc
aaggcatacaatgccgatttcgatggtgacgagatgaatgcgcactatccacagagcgag
gtggcacgttccgaggcctataatcttgtcaatgtggccagcaattatttggtgcccaag
gacggtactccacttggtggccttatacaggatcaggttatttcgggcgtcaagctgtca
atacgcggtcgcttcttcaaccgcgaggattatcagcagttggttttccagggtctgtcg
catcttaaaggcgatgtcaagttactgccaccggctatacaaaagccagcaatgttgtgg
tctggtaagcaagtgctctcgaccataatcattaatctgatacccgatggctatgagcac
atcaatttagattcctttgccaaaataggtggcaagaattggaatgtggctaaaccgcgt
acaccgctgtgtggctcgaatccgctggagcaggagctcagtgagagtcaagtgcaaata
cgtaagggtgagcttctggtgggcgttctggacaagcagcagtatggtgccactactttt
ggccttattcactgcatgtacgagctgtatggcggcgatgtgtccactcgcctgctaacc
gccttcaccaaggtgtttacatttttcctgcagcttgagggctttactttgggtgtcaag
gacattttggtaaccgatgaggcggatcgcaggcgtcgaaaaatcattcgagagtgtcgt
gatgtgggcaacagcgccgttgccgccgctttggagctggaggatgtgccaccgcacgat
gtattggccgaacaaatggaggccgcctatgttaaggactcaaagtttcgagttctgcta
gatcgcaaatacaaatcgctactggacggctacacaaatgacattaataaaacttgcctg
cccggcggtctgatcaccaagtttccatcaaacaatctgcagttaatggtgttgtctggc
gccaaaggctctatggttaacactatgcaaatttcctgcctgcttgggcaaattgagctg
gaaggcaagcgaccgccgttgatgatatctggaaaatcgctacccagttttacctctttt
gagacatcaccaaagtcgggcggctttattgatgggcgctttatgacaggcatacagccg
caggactttttctttcactgcatggctggtcgtgaaggtctcatcgatactgctgtgaag
acatcccgttccggttatcttcagcgctgtcttatcaagcacttggagggattgagtgtt
cactatgacctaactgtgcgcgacagtgacaacagtgtagtgcagtttctttacggcgag
gacggcctagacatacttaagtcaaagttctttaacggaaaattctgcgcagattttctt
gcacaaaacgcaaaggctgttctgcggcccagccaactgcagctgatgaaggacgaggag
tgccttgccaaggtactgcgccatgagaaacacatacgtagctggcagaagaaacagcct
gccaaactgcatgctgctttcacccacttttctgaggagcttcgaaacgaagtggaagtt
aagcgaccaaatgagataaatgccaagacgggacgccggcgtttcgacgagggcctgctc
aaactgtggaagaaggccgatgccgaggacaaagcactgtaccgcaagaaatatgcacgc
tgtcctgatcccaccgtggccgtatacaaacaggataattattatggtgccgtttctgag
cgcacgcgtcaattgatcgatgactatgcgctcaagcacccgtcacagaaacaaatcata
gcagatataatgcacatgaagagcatcaaggcgttggcctcccccggcgaaccagtcggt
ctgattgcagcccagtcgattggtgaaccatccacccagatgacattgaataccttccat
ttcgctggtcgtggtgaaatgaacgttacgctaggtatacctcgtttacgggaaattcta
atgctggcgtcctcgaatatcaagaccccttcaatggacatacccatcaagccgggacag
cagcataatgcagagaagttgcgcatttccctcaactgtgtgaccttggccagtctgctg
gaatccgtgcacataagcacaagcttgacaatggaaccggaacgcgcgtatgtctatgac
ttgcacttcaagttcctgccacgcgagaattacaaggaggattacagtgtgaggcccaag
cgtattatcaaatacatgcaacagacatacttcaagcagctcattcgtgctatcataaag
gtgtccaacgccaagaagacttccaaaatcgtcgtggtagatgagaaaaaggagtctggc
aacaagcaggacgaggacaatgatctagagttggatgctgccgatgacgtgggcacacaa
aaggctcaagacaatgatgacgactcctcagatgacggcggtgacgatgacgcgactggc
attaaactcaagcaacgcaaaaccgacgaaaaggactatgacgatccggatgatgttgag
gaaataattgatgccaatgacgatgaagaggagcccgatgaagaggacgcattcggaaat
gaaccggcaaacgacgaaaacgccgaggtggacgataagtcagtggaaaagttgcttagc
aaccaaatggttcaagattacacctacgacaaggagcatcatctttggtgcagagttaaa
ctcaatctgagcgttcgctaccagaagcccgatctgacatccatcatacgcgaacttgcc
gccaagagcattgtacatcaggtgccgcacattaagcgcgccattatctacaagggcaat
gacgatgaacagttgctgaaaacagatggcatcaatattggtgaaatgttccaacacaac
aaaatcttggacctgaatcgtttgtactccaacgatatacatgctatagcacggacatat
ggcatcgaagctgcaaaccaggtcattgtcaaggaagtgagcaatgtgttcaaggtttat
ggaattaccgtggatcgacgacatttgtcactgattgccgactacatgacctttgacggc
accttccagccgctctcacgcaaaggcatggagcactcctcttcgccgttgcagcaaatg
tcctttgaatccagtttgcagtttctgcgcaacgcagctggctttggacgtcccgacgag
ctgaattcaccatcaagtcgcttgatggtaggcttgcctgttcgaaatggcacaggcgct
tttgagttgttaacgaaaatttgctaa
DBGET
integrated database retrieval system
