Drosophila virilis: 6626687
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Entry
6626687 CDS
T01066
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dvi
Drosophila virilis
Pathway
dvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6626687 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6626687 (Taf5)
03036 Chromosome and associated proteins [BR:
dvi03036
]
6626687 (Taf5)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
6626687 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
6626687 (Taf5)
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
6626687 (Taf5)
STAGA complex
6626687 (Taf5)
TFTC complex
6626687 (Taf5)
SAGA complex
6626687 (Taf5)
SLIK complex
6626687 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
PROPPIN
WD40_like
Motif
Other DBs
NCBI-GeneID:
6626687
NCBI-ProteinID:
XP_002049824
UniProt:
B4LMS6
LinkDB
All DBs
Position
5:15195094..15197461
Genome browser
AA seq
708 aa
AA seq
DB search
MSLEVTNINGGNGSETPSQSQDKRELLCLLKLLRKYQLKGTEELLCQEANVNSADLANIC
DGDVKAVLSAALALADDDHKRQSTQAQASTSVEAKAVTEANAAEALAKFIGDDAFDAQHY
EQAYEELRTFVEESLDIYKHELSMVLYPILVQIYFKILASGQIEKARAFIEKYKSDLDGY
YIEGLFNLLLISKPEKLLDNDLVSAMETDKFVIRMSRDAHSLFKRHIQDRRQEVVADIVS
KYLHFDTYEGMARNKLQCVATAGSHIGDAKRQDNKIRVYYGLLKEVDFQTLTTPAPAPEE
EDDDPDAPDRPKKKKPKKDPLLSKKSKSDPNAPAIDRIPLPELKDADKLLKLKALREASK
RLPLSKDQLPSAVFYTILNSMQGVTCAEISDDSTMLACGFGDSTVRIWSLTPAKLRALKE
ADALRELDKESADINARMLDERSGEMTRSFLGHTGPVYRCAFAPEMNLLLSCSEDSTIRL
WSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSD
VDCVQFHPNSNYVATGSSDRTVRLWDALTGQSVRLMTGHKGTVSSLAFSTCGRYLASGSV
DHNIIIWDLSNGSLVTTLLRHTSTVSTITFSRDGTVLAAAGLDNNLTLWDFHKLTDDYLS
NQITVSHHQDENDEDVYLLRTFPSKNSPFVTLHFTRRNLLMCVGLFKS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagaagtaaccaacataaatggcggcaatggcagcgagactccgtcacagtcg
caggacaagcgggagctactatgcttgctcaagctgctgagaaaatatcaactaaaagga
acggaggagctgctctgccaagaggcaaatgtgaacagtgcagatctcgctaatatctgt
gatggcgacgtcaaggcagtgctcagtgccgcattggccctggctgatgacgaccacaag
cgccagtctacccaggcgcaagcatcaacgtccgtcgaagcgaaggccgtgaccgaagcg
aacgcagccgaagcgctggcaaagtttatcggcgatgatgcctttgatgcccagcattat
gagcaggcgtacgaggagttgcgcacgtttgtggaggaatccttggacatttataagcac
gagctgtctatggtcctttatccgatactggtgcaaatctatttcaagattcttgccagc
gggcagattgagaaggcacgagcgttcattgagaaatacaaatcggatctggatggctac
tatatcgagggtctgttcaacttgttgctaatatcgaagccggagaagctgctggataac
gatctggtgtctgcaatggagacggataagttcgtgatacgcatgtcgcgggatgcccat
tcgctgttcaagcgtcacatacaggatcgcaggcaggaggtggtagcggacatcgtgtcc
aagtatctgcattttgatacctacgagggcatggcgcgcaacaagttgcagtgcgtggca
acggctggctcgcacattggcgacgcaaagcgacaggataacaaaatccgtgtctactat
ggtctgctcaaagaggtggactttcagacgttgaccacgccagcgccggcacccgaagaa
gaggacgatgatccggatgcgccagatcgacccaaaaagaagaagcccaaaaaagatccg
ctgctttccaagaaatcgaaatcagaccccaatgcacctgccatagatcgcatacccttg
ccggagctcaaggacgcagacaaattgctcaagctcaaggcgttgcgtgaggccagcaag
cgtttgccgctcagcaaggatcagctgccctctgccgtattctacacaatactcaactct
atgcagggggtcacatgtgccgagatatctgatgattccacaatgctggcctgcggattt
ggtgactccactgtgcgcatctggtcgctgacgccagcgaaactgcgcgcactcaaagag
gccgatgcgctacgtgaactcgataaggagtcggctgacataaatgcccgaatgctggat
gagcgcagcggcgagatgacgcgctccttcttggggcacacgggcccagtctatcgctgt
gcctttgcgcccgagatgaatttgctgctttcctgctcagaggatagcaccatccggctg
tggtccctgctcacctggtcttgcgtggtcacctatcgcggccacgtctatcccgtttgg
gatgtgcgctttgcgccacacggctactattttgtgtcatgctcctatgacaaaactgct
cgcctgtgggccaccgactcaaatcaggcgctacgcgtctttgtcggtcacctttcggac
gtggactgcgtgcaatttcatcccaactccaattacgtagccactgggtccagcgatcgc
actgtgcgcctgtgggacgcgctaacaggccagtccgtgcgcctcatgaccggccataag
ggcacggttagctctctggcgttttctacatgcggccgttatttggcttccggctccgtc
gaccacaacatcatcatctgggacctgtcgaacggctcattggtcaccacgctgttgcgg
cacaccagcaccgtatccaccattacattcagccgcgatggcacagtgctggccgccgcc
ggactcgacaacaatctgacactctgggactttcacaagctcaccgatgactatctgagc
aaccagatcacagtgtcgcatcatcaggacgaaaatgacgaggacgtttacctgttgcgc
actttccccagcaagaactcgccgtttgtgaccctccacttcacgcgccgcaatctcttg
atgtgcgtcggtctgttcaagagctag
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integrated database retrieval system
