Drosophila virilis: 6626898
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Entry
6626898 CDS
T01066
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6626898
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
6626898
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
6626898
NCBI-ProteinID:
XP_015029070
UniProt:
B4LMB8
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All DBs
Position
5:7553273..7559354
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AA seq
1211 aa
AA seq
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MEDFNSIKPNSSVVKIAACLEKIYNKIVESKEKQLAEHQIKEIEFLKTQCKHEHMQLSLM
SCQTLVRLVDEGVLDANSVQNTLLSMLPNAGPMHFAIITESILGLQLLGLKRKTSLLKDK
EVYQCPYGLKTQLHPLISLLQHSSANMHDVSNKIIGVCQHHDKHIRDYSIEYLRPVFLYV
LCNPQTLQDVKPIWTCLLSLSHSQPEARALMQELLSWSKFNNASTCRCTSILVIEAIDYF
LQQADHAQSIDLCIYQAQLIKQLAHFGIDPRPSLQCLLRVLHATREHTRHHYHVLLVLLA
ECLHVLSPFYLADLLRIIVFVVVQERCGHEYILNMCLDGIIQWMSQTAFIPAEGLALANQ
IVQRVLEQQKPQVDGKVEFATRICTKELQPAHMRNYHPDIAIAFDLANLVESFDVADNKD
VFAFVDALNVKANTAFCQRLHLFLRALFLSREPPVDCWFKIYEVILQIIKVNETIAYDFL
MTYIFKLAHEHNPELQLELLRGLASFAVSKDNVPMILNTIRNLSTDNATFCVDLYLRLWR
VETRTYPFLLKQIAQPLPDNDKRWELEIARTHAMREICQEKPTLHGSELLPHLSNTLNSC
TDESGDLATSLALDAIYALCDSHTVNIASTWQALGSKFRSEQRPQTLKSLYHLFGLVPLL
QTPTLEYEKLADDALEQLWQAVSRPNTDATQVRNALVALKSYEPGNTLCLRHIPPQFRFE
ITGVGAVGVTTGAREVINLQQQQESIPGEVWVQLLQKIRPECGDAAADLVAHYIGNEISA
FRSGVYRLPEGKPEPRKLTGLFATSPLRAVSNYLVSQSRFGDYVPEPYAVTYALRALSKR
FAKPIPPMDWSCLTSFFHLSFDARKYCIMIAKNQALHSGTARRLLENFLADFEPNCFEED
LLLLFSLLPEIGNSVSLQILKNFAEKVAVYCFKESQLNDFAEGCLFEKFLDSVRYIYTDK
CEIPEVLDVFTLIVERYMDSMNLDSRLFERYTEVVSVLHPNAIDGLTTPANWWETPAGKL
KKATIIRCYLVLYNEKLPNPLKWLTPIIDAYERRAEERPFFYRHLATTLYAFGSDEHACN
WTMEIFLEIQMLLAEASNKEKLNRALYLLDIFILAVDVLSGCAVLLGSVDVVATDGKERF
ALFPESLQFLCDHIFWKDQEAKIYEFLYNLYKHASIPLAYAAIFKEAIICSRNKPYFDNK
GVWTKYVGLRK
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggaggacttcaacagcattaagccgaacagttcggtggtaaagatagccgcttgcttg
gagaaaatctacaataaaatcgttgagtcgaaggagaagcaattggccgagcaccaaatc
aaggaaatcgagttcctgaaaacccaatgcaagcacgagcacatgcaactcagcctgatg
agctgtcagacgctggtccgcctagtcgacgagggtgtcctagatgccaacagcgtacag
aacacgctcctatcaatgctgcccaatgcggggccgatgcatttcgcaattattacggag
agcattctgggcctgcagctgctgggtctgaaacgaaagacttcgctgcttaaggacaag
gaggtgtatcagtgtccctatggcttgaagacgcagctgcatccgctgatatcgctgctg
cagcacagcagcgccaacatgcatgatgtcagcaacaagattattggcgtctgccagcat
cacgacaagcacattcgggactacagcattgagtatctgcgtcccgtatttctctatgtg
ctgtgcaatccgcagacgctgcaggatgtgaagccaatttggacgtgcctgctgagcctg
agccacagccagccagaggcgagagctcttatgcaggagctgctgtcgtggagcaagttc
aacaatgcgagcacctgtcggtgcaccagcattctggttatcgaggccatcgattacttc
ttgcagcaggcggaccatgcccagtccatcgatctgtgcatttaccaggcgcagcttatc
aagcagctggcccactttggcatcgacccgcgtcccagtctgcagtgcctgttgcgtgtg
ttgcatgccacgcgggagcacacgcgacatcactaccatgtgctgctagtgctgctcgcc
gaatgcctgcacgtgctgtcgcccttctacctggctgatctgctgcgcattattgtgttt
gtggtggtgcaggagcgctgtggccatgaatacattctgaacatgtgtctggacggcatc
attcagtggatgtctcagactgcattcatacccgcagagggcctggcgctagccaatcaa
attgtgcagcgcgtactggagcagcaaaagccgcaagtggatggaaaagtagagtttgcg
acgcgcatctgcaccaaggaactgcagccggcgcatatgcgaaactatcatccggacata
gctattgccttcgatctggccaatctggtggagtcctttgatgttgctgacaacaaggac
gtgtttgccttcgtcgacgctctaaatgtgaaggccaatacggccttttgtcagcgtctg
catttgtttctgcgcgcgctcttcctctcccgcgaaccgcccgtcgactgttggttcaaa
atctacgaggtcatactgcagatcatcaaggttaacgagaccattgcctacgatttcctc
atgacgtacattttcaagctcgcccacgaacacaatccggagctgcagctggaactgctg
cgcggcctggcgagctttgccgtgtccaaggataatgtgcccatgatactgaacaccata
cggaatctttcaacagacaatgccaccttctgtgtggatttgtatttgcgactgtggcgc
gtagaaacgcgcacctatccctttttgttgaagcaaattgcacagccgttgccggacaac
gataaacgctgggagctggaaatagcacgtactcatgccatgcgcgaaatctgccaggaa
aaacccacgctgcatggctcggagctgctgccacatttgagcaacactctgaacagctgc
accgacgaatcgggtgatttagccacgtcgctggcgttggacgccatttatgcgctatgc
gacagccacaccgtaaacattgcctcaacatggcaggctctgggcagcaagtttcgtagt
gaacagcgtccccagacgctaaaatcgctctatcacctgtttggtctggtgccgctgctg
caaacaccgacgctggagtatgagaaactggcggatgatgcactggagcagctgtggcag
gcagttagccgcccgaacacagacgctacacaggtgcgaaatgcacttgttgcgctcaag
agttatgagccaggcaacacgctgtgcctgcgccacataccgccgcaatttcgattcgaa
attactggagtgggcgctgtgggtgtgactactggagcacgtgaagtgatcaatttgcag
cagcagcaggagtccattccaggcgaggtatgggtgcagctattgcaaaagatacgaccc
gagtgcggcgatgcggctgctgatctggtggcccattatattggcaatgagatcagcgcc
tttcgcagcggcgtctatcgtctgcccgagggcaaaccggagccacgcaagctgacaggt
ctctttgccaccagtccgctgcgtgctgtcagcaattatctggtgagtcagtctcggttc
ggcgactacgtgccagaaccctatgccgtcacctatgctctgcgcgcactctccaagcga
ttcgccaagccgataccaccgatggactggagctgcctgaccagcttctttcacctgtcg
tttgatgctcgcaaatactgcatcatgatagccaaaaaccaggcactgcacagcggcact
gctcgacgactgctagaaaatttcctagccgatttcgagcccaattgctttgaggaggat
ctgctgctattgttctccctgctgcctgaaattggcaacagcgtgagtttgcaaatacta
aaaaactttgccgagaaagtagctgtctactgcttcaaggaatcgcagctaaacgacttt
gcagagggttgcctgtttgagaagtttctggacagcgtaaggtacatatacaccgacaaa
tgtgagatacccgaggtgctggacgtattcacgcttatagtggagcgttatatggactcg
atgaatttggattcaagattgtttgagcgttacaccgaagtggtctctgtgctgcatccc
aatgccatcgatgggttaaccacgccagcgaattggtgggaaacaccggcgggtaaacta
aagaaggcaaccataatccgctgctatctggtgctatataatgaaaaactgccgaatcct
ttaaaatggctaacgcccattatcgatgcctacgaacgccgggcggaggaacgccccttc
ttctatcgccatctggcgaccacactgtatgcctttggcagcgatgagcatgcgtgtaac
tggacaatggaaatctttttggagatccaaatgctgctcgccgaggcttccaacaaagag
aaattaaacagagcgctatatttgctggatatttttatactggcagtggatgtgttgtcc
ggctgtgccgtactgctgggcagtgtggatgtcgtggccacagatggcaaggaacgattc
gcattattcccggagagcttgcagtttctatgtgatcacatattttggaaggatcaggag
gcaaagatttatgaatttctttataatctttataagcatgcgtcaataccgctagcatat
gctgccatttttaaagaagcgattatttgttcgcgcaacaagccctactttgataacaaa
ggtgtttggaccaaatacgtgggtttgcgtaaatga
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