Drosophila virilis: 6627067
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Entry
6627067 CDS
T01066
Symbol
Tfb1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dvi
Drosophila virilis
Pathway
dvi03022
Basal transcription factors
dvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6627067 (Tfb1)
09124 Replication and repair
03420 Nucleotide excision repair
6627067 (Tfb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6627067 (Tfb1)
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6627067 (Tfb1)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6627067 (Tfb1)
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6627067 (Tfb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
FKBP26_C
Motif
Other DBs
NCBI-GeneID:
6627067
NCBI-ProteinID:
XP_002050186
UniProt:
B4LQ94
LinkDB
All DBs
Position
5:complement(12640116..12642691)
Genome browser
AA seq
581 aa
AA seq
DB search
MTTSSEDVLLQMGEVRYKKGDGTLYVMNERLAWMAEHRDTVTVSHRYADIKTQKISPDGK
PKVQLQVVLHDGNTSTFHFVNRQGQPAMLADRDKVKELLQQLLPNFKRKVDKDLEDKNRI
LVENPNLLQLYKDLVITKVLTSDEFWATHAKDHALKKMGKSQEIGVSGAFLADIKPQTDG
CNGLKYNLTSDVIHCIFKTYPAVKRKHMENVPAKMPESEFWTKFFQSHYFHRDRLTAGTK
DIFTECGKIDDQALKASVQQAAGDPLLDLKKFEDVPLEEGFGSVAGDRNVVNSGNIVHQN
MIKRFNQHSIMVLKTCANVNATSATATNGTNVANGPLGQSTYTNGLNGKGAKHTVDSAPS
NIDAPQAKRQRLIEKIHYEDLGNPLIESDEDSHQSTNKAKQFELSKVERYLNGPLQNHMY
ENHSDALSLDDVQYKLVRNSESWLDRSAQRNVICSKAAVNALGELSPGGSLMRGFQEQSA
GQLVPRDFQRDLRHLYLSLLELLKHFWNCFPPTTEELETKLQRMHETLQRFKMAKLVPFE
NRAMHELSPLRSSLTQHMNMLLRTANSKYATWKERKLRNNR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagcagtgaagatgtgctcctccaaatgggtgaggtgcgctacaagaagggt
gacggcacgctctatgtaatgaacgagcgcttagcatggatggcggagcaccgggacacg
gtgaccgtgtcccatcgctatgcggatataaaaactcagaagatctcgcccgatggcaag
ccaaaggtgcagctacaggtggtgctgcatgacggcaacacttcgacgttccattttgtt
aaccgtcagggccagccggccatgcttgccgatcgtgacaaggtcaaggagctgcttcag
cagctgctgcccaatttcaagcggaaggtagacaaagatctggaggacaagaatcgtatt
ctagtggagaatcccaacttgctgcagctatacaaggatctggttataaccaaagtactt
accagcgatgagttctgggccacgcacgccaaagatcatgctctaaaaaagatgggcaag
agtcaggaaatcggtgtctctggcgcttttttggccgatattaagccccagacggacggt
tgcaatggccttaaatacaatcttacctctgatgtcatacactgcatttttaaaacatat
cccgccgttaagcgtaaacatatggagaatgttcccgccaaaatgcctgaatcagagttc
tggacgaagttctttcaatcgcactattttcatcgagatcgtctcaccgctggcaccaag
gacatctttacggagtgcggcaaaatcgatgatcaggcgcttaaggcgtccgtgcagcag
gctgcaggtgatccgctgttggatttgaaaaaatttgaggatgttccgctggaggagggc
ttcggtagcgttgccggcgatcgcaatgtggtaaacagtgggaatattgtgcatcagaac
atgatcaagcgcttcaatcagcattcaatcatggtactgaagacgtgcgctaatgttaat
gccacttctgccaccgctactaatggcactaacgtagctaatggcccactagggcaatcc
acctacacaaacggactaaatggcaagggagccaagcatacggtcgatagtgctcccagt
aatattgatgcaccacaagcgaagaggcagcgtctcattgaaaagatacactacgaagat
ttgggcaatccgctaatcgaatcggatgaggattcgcatcaatcgaccaacaaagccaaa
caatttgagctatccaaagtggaacgctacctcaacggaccgttgcagaatcacatgtac
gaaaatcatagcgatgctctcagtctggacgatgtacagtacaagctggttcgcaactcg
gaatcctggctggatcgcagtgcgcagcgcaatgtcatctgctccaaggcagcggtcaat
gctctaggcgagctcagtccaggtggctctctcatgcgtggctttcaggagcagtcagcg
gggcagctggtaccacgcgactttcaacgcgacttgcggcacttgtatctgtcgctcttg
gagctgctgaaacatttttggaactgctttccacccaccacggaggagctggaaacaaag
ctacagcgtatgcacgagacactgcagcgtttcaaaatggccaagctagtgcctttcgag
aatcgtgcaatgcatgagctctcgccgctgcgatcatcactcacgcaacatatgaacatg
ctgctgcgcaccgccaactccaagtatgccacatggaaggagcgcaagctgcgcaacaat
agataa
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integrated database retrieval system
