Drosophila virilis: 6627102
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Entry
6627102 CDS
T01066
Symbol
Spt5
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
dvi
Drosophila virilis
Pathway
dvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
6627102 (Spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6627102 (Spt5)
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6627102 (Spt5)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
6627102 (Spt5)
RNA polymerase I system
6627102 (Spt5)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
6627102 (Spt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOW6_SPT5
KOWx_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
CTD
DUF3912
Motif
Other DBs
NCBI-GeneID:
6627102
NCBI-ProteinID:
XP_002049945
UniProt:
B4LNW9
LinkDB
All DBs
Position
5:14402882..14407209
Genome browser
AA seq
1085 aa
AA seq
DB search
MSDSEVSNMSDSGSDDGSISNKSQQSVRSKSGFRSRSRSLSRSRSRSRSRSSRSRSQSAH
SGSGSDSPQPQGGRGHRRKTEDSEDEDAQGEDIDSEEYEEEENEDDHPRKKKKKERFGGF
IIDEAEVDDEVDEDDEWEEGANEIGIVGNEIDELGPTARDIEIRRRGTNLWDTQKEDEIE
EYLRKKYADESMVRRHFGDGGEEMSDEITQQTLLPGIKDPNLWMVKCRIGEEKATALLLM
RKFLTYLNTDDPLQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPI
KEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMR
GALRTTATESDDGKRKKKRRPPAKPFDPEAVRAIGGEVHSDGDFLLFEGNRYSRKGFLYK
NFTMSAILSEGVKPTLAELERFEEAPEEVNLEIMASVKDDPTAAHSFSMGDNVEVCVGDL
ENLQAKIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLII
RVEPSRVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRL
ERENFHVLGMNGKCIECKPTALHKRRENQNTVALDADQNQIRRRDIVKVMEGPHAGRSGE
IKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVSNANTLGGLGFMSPRIQSPM
HPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDATESTARVELHT
SCQTISVDRNHIVIVGEPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVGSQTPN
WDTDTRTPYGTMTPSHDGSMTPRHGAWDPTANTTPARNTDFDYSLEEPSPSPGYNPSTPG
YQMSSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGVPQS
PYNPQTPGASLDSSMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTVSNGVCSVFLRQEDRS
VSIVSEHLAPVPPNSGDEFKVIYGEERESVGKVLSKQEGDVLVCKINDEVKMIPVNHLCK
MKSID
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggaagtcagcaatatgtcggatagtggctccgacgacggatcgatatcg
aacaagtcgcaacaaagtgttagatccaaatctggcttccgctcaaggtcaaggtcgcta
tccagatccaggtccaggtctaggtcgagatcttctcgatcccgatctcaatcggcccat
tctggctcaggatccgattccccgcaacctcaagggggacgtggacaccgtcgcaaaacc
gaagattctgaagatgaagacgcacaaggggaggatatagattccgaagagtacgaagag
gaagaaaatgaagatgaccatccacggaaaaaaaagaaaaaggaacgctttggtggcttc
atcattgacgaagctgaagtggatgacgaggttgatgaagacgacgagtgggaggagggt
gccaacgaaattggtatcgttggcaatgaaatagatgagctgggccctaccgccagagat
attgaaatacgacgcagaggaaccaatttatgggacactcaaaaagaagacgaaattgag
gagtatctaagaaagaaatatgctgacgaatcgatggtaagacgacactttggcgacggc
ggcgaggaaatgtccgatgaaattacacagcaaacccttttgccgggtatcaaagatccc
aatttgtggatggtgaaatgccgcataggagaagagaaggcgacagcattgctcttgatg
agaaagttcctaacttatctcaatacagatgatccattgcaaatcaaatcaattatcgca
ccagaaggcgtgaaaggatatatttatttggaagcttacaaacaaactcatgtaaagaca
gctatcgacaatgtgggtaatcttcgaatgggcaaatggaaacaagaaatggttcctatt
aaggaaatgactgatgtgcttaaagtagttaaagagcaagtcggccttaaggtaaaacag
tgggtgcgcttaaagcgtggcttgtacaaggatgacattgcacaagtagattatgtagat
ctggcacagaaccaggtgcatcttaagcttcttcctcgtatcgattacactcgaatgcgc
ggtgcattacgtaccacggcgacggaaagtgatgatgggaagcgtaaaaagaaacgcagg
ccaccggcaaaaccatttgatccagaagctgttagggctatcggaggggaagttcactca
gatggagattttttgctcttcgaaggaaatcgttattcgcgaaagggatttctttataaa
aattttaccatgtcagcaattttgtccgagggcgtaaaacccactctggctgaacttgag
cgattcgaagaagcaccggaggaagttaacctggagattatggccagcgttaaagatgat
cccacggctgcccattcattttcaatgggcgacaatgtcgaagtttgtgtcggtgatttg
gaaaacttgcaagcaaagattgttgccattgacggcacaatgattacggttatgcccaaa
catcaggacttaaaggatcctcttatattcaaagcaagcgagttacgcaaatactttaag
acgggtgatcatgcgcgagtgctggcgggccgctacgaaggtgaaacaggtcttataatt
cgcgtagagccatcgcgggttgtgcttgtctcagatttgaccaatcacgaacttgaggtt
ttgccccgagacttgcaactgtgctctgatgtagctaccggagttgattgtcttggtcaa
ttccaatggggagatctggtccagcttgactcacaaaatgttggtgttattgtgcgcttg
gagcgtgagaacttccacgtcttgggcatgaatggaaaatgtattgagtgcaagccaaca
gccttgcacaaacggcgtgaaaatcagaatactgttgctctggatgcagatcaaaatcag
attcgccgccgcgatattgtgaaagttatggagggtccacatgccggacgctctggagaa
ataaagcacttgtatcgcagcttagcatttctccactgtcgtatgtacacggagaatggc
ggtattttcgtatgcaagacgcgtcacttacaactcgctggtggaagtaaaacgaatgtg
agcaatgctaatacgcttggaggattgggatttatgtcacctcgaatccaatcgccaatg
catccgtctggcgggcgtggcgcacgtggaggatcgcgcggtggtcgcggtggcttccgt
gtgacgcgtgaccgtgaacttttaggaaaaactatcaaaatttgtggtggaccctacaaa
ggagccgttggcatcgtaaaagatgcaactgagagcacagctcgtgtggaattgcataca
tcatgccaaacgatttccgtggatcgtaaccatattgttattgtcggcgagcctggtaaa
gagggcagtgtttccacttatggtcgcacaccagcgcgtacaccgggttacggagcgcag
actcccagctacaccgctgctggatccaaaaccccattggttggtagtcagacacctaat
tgggacaccgatactaggacaccttatggtacaatgacgccatctcacgatggcagtatg
acgccacgtcatggagcatgggatcctactgcaaatacgaccccggctcgtaatacagat
tttgattattcgcttgaggaaccaagccccagcccaggatataatccaagcactcctggg
tatcaaatgtcgtcacaatttgctccacaaactccgggtactctttacggctcggataga
agctacagtccgtttaatccgagtcctagccctgcaccatcgccatacccagttggttat
atgaatacaccatcgccatcaacttattcaccgaacactcccggtggtgtaccacagtct
ccgtacaatccgcaaacacctggagctagcctcgactcttcgatgggcgattggtgtacc
actgacattgaagttcggattcatacgcatgacgatactgatctcgttggccagactggt
attatccgtacagtctcaaatggtgtctgttctgtatttctgcgtcaggaagatcgtagc
gtgtccattgttagtgagcacctggctcctgttccacccaatagtggagatgaattcaaa
gttatatatggagaagaacgagagtctgttggcaaagttttgtccaaacaggagggtgat
gttctcgtctgtaagataaatgacgaagtcaaaatgatacctgtaaatcatttgtgtaag
atgaagtccattgattag
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integrated database retrieval system
