Drosophila virilis: 6627234 Help Entry 6627234           CDS       T01066                                  Name (RefSeq) spatacsin   KO K19026   spatacsin Organism dvi  Drosophila virilis Brite KEGG Orthology (KO) [BR:dvi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dvi03400]     6627234 DNA repair and recombination proteins [BR:dvi03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      6627234 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C MASE2 Motif Other DBs NCBI-GeneID:  6627234 NCBI-ProteinID:  XP_002050179 UniProt:  B4LQ87 LinkDB All DBs Position 5:12714333..12720296 Genome browser AA seq 1817 aa AA seqDB search MHTAQARNKIFKSWSGISEVSIIKEVATKGEHIDLCMEYWAGKRKIPVQEYRHYFYDVVQ AYVQRLLSERLVCKADNVLHNVERDVKCFFYQYACECDDADLSEFVLDHLRCREPQLFEQ EQPVLAYYWSLVQQLRECSDLLARHQALLPRVHIEALMTLPEQTLQLLIVELYFANGNES LLPELNKQLVWQHLVDTGRLDRLRRWCWCQEAAAGTADLRPLEQAYARWKIEPLMYEYAL EHLQQPCEPLRNYFARAGYFFSAESSDMSTLLRRLCTMQCLEQHTELLSRQPLARHLLER GYHSLLLLDCVPVSALEQLAGENEPLLTLIIDLKTHDLMQREGFEMISKSVQSYLERTHH GADSLQEQPLLTFYDFLCHEPSVRALEGFLSSSNLRRVPYLNSLMARFEHHGTSSSDAVP SAHELFHKFKKVNFATLAAAAGQGELVSFSNARLSQRYASKAQLNYTHYLKQQRSAYAVY YFLMEQLQLYGQITRTQLFHACETATQLALQHAGDEELVTHCVACCEMLDFDTQTLRSFL HLQRLLPATGVSGGYTSQLQHWDQALVQQLVATPEQFPLESYQALMRLAARNVQGKWPSA LLQHFAARNDWWQLLLLFQYFDLPLSALKQLLPHFKCGTLGVHLLRALSYDCIHERQHKR AGNRRSDGQTNSSQETMTNSSHSSGLDANLQQLQRDAGQSLCSLLTHNAQQDLFALVLCS SNSLPEETIGSMARFMELMQSSAQHCSSINLLKHCVRQQMPVLAVLAATLGEHNRDWCWL LWLAVASGQWLQLLQAATKSKEPQQQTELVWLVIRGAVSGGQLNALLHSFCIFQPHCKIV HLCHFLQLTAQQQDFSDATIVELRQFFCSWSQDAVQLPLCEPLARKQLLQRCIGLLLIQL EANFDCIMQQQKFLDCICRSDVGDICDLLDFCLLHRIFGVAAPWLRQLGINYEQLVRRDS AEYKRLVDALTEAKAYEQALQLASLLQLPLADIVYAKWLAELEAGQLRLHAEYEQEIAQH ALPPAILVNFLLQAAAQQPESQLRRRYELLQSALGVIKQHHLFPNECFDRDQIEYDMVLC YLQLEQEQLTIVDIYHSEYFEQIMRQERCVLYKSFSELKELAGIDDLSIASKSQLTGEME QRLDALLNMLLDEGDIVEALRLQELFEFRPNDLRFIVFAMALAEGMTSIANLSSKERQLL SDIEKSAFPKFNRLTLNQSPMTRCSSDLSGSCSTLEFEEIPSKEKQQTLETLLGIGSKLK HGVELGRRIVLAYRAAMYLDKEYLDVLRTKDVSVLLKSAAEEDCLQRLLVVSDIHISTRL TPQEIADSLALELTTCIVRPRFYIFHASQQPRNAPRNADLWGHNIDRDFHLFLELTPNTT LLGNCLLEYCDALKAYRRYQDNKPYEQSTAFERLSGIITLYGLPNSGSSSSNVPGSPGIP QVLSHKKQNQIYVELLIKAHLCFVHECSMEGIASVLERAKLLNAQLTNAKSWSLIVRLLI GIARYREMFYCFDALIENEQFESLLGQFDEDQKSGLRQAILGYLREYNPKNGKDLLRLAA HHFLMYKELAEMWSQEAQGILDRVRSAASTAAEPSKLKVSLELQQQLQQALEFFTHATEN YLLDNKLILAQQSVARAELVAMQLDLCNKALEKRGSGPAGVGTSSTAPLCISVIGVQTRE QFRELINNHLRVPQTLILSRAYGHDVNWSEALLTQFVLLQRRSYLQDYRGHQRINDNVIE QVVKGYILHTQNNPSSAKHEESLAQLVELIRSVTLKYKLASILGLKGIVMALINDSTVHY LRDTNFGRNEMHNVTNM NT seq 5454 nt NT seq  +upstreamnt  +downstreamnt atgcatacggcccaggcacggaataaaatattcaaaagctggtcaggcatcagcgaggtg tccatcatcaaggaggtggccaccaagggcgagcacatcgatctgtgcatggaatattgg gctggcaagcgaaagataccagttcaagaatacagacattacttttacgatgtggtacag gcctatgtgcagcgactgctgtccgagcggctcgtctgcaaggcggacaacgtgctgcac aatgtggagcgggatgtcaagtgcttcttctatcaatatgcctgcgaatgcgacgatgcg gatctgagcgagtttgtgttggatcatttgcgctgtcgtgagccgcagctgtttgagcag gaacagcccgtcctggcgtattactggtccctggtgcagcagctgcgcgagtgcagcgat ctgctggcccggcaccaggcgctgttgccacgagttcacatcgaggcgttgatgacgctg cccgagcaaacgctgcagctgctcattgttgaactttactttgccaatggcaatgaatca ctgctgccggagctgaacaagcagctggtgtggcagcatctggtagacaccggacgtttg gacagactgcgtcgctggtgctggtgccaggaggctgcggcaggcacagctgacttgcgg ccactggagcaggcctatgcacgctggaagatcgagccactcatgtatgaatatgccctg gagcacttgcagcagccatgtgagccgctgcgcaattactttgcccgcgctggctacttt ttttcagctgaatcctcggacatgtccacgctgctgcgtcgcctgtgcacaatgcagtgc ctggagcagcacacggaactgctcagtcgccagccactggcgcgtcatctgctagagcgt ggctatcactccctgctgctgttagattgtgtgcccgtctcggcgctggagcagctggcg ggcgagaatgagccgttgctgacactaataatcgatctcaagacacatgacctcatgcag cgcgagggtttcgaaatgatatccaagagtgttcagagctatctggagcgcacgcaccat ggcgccgattcgctgcaggagcagccgctgctgaccttctatgacttcctctgccatgag cccagcgtgcgtgctctggagggttttctctcctccagcaatttgcggcgagtgccgtac ctgaactccctgatggcgcgctttgagcatcatggcacgagcagttcggatgcggtgccc agcgctcacgagctgttccacaagttcaagaaggtcaactttgctacactggcggcggcg gcgggtcagggcgagttggttagcttctcgaatgcgcgtctaagtcaacgctatgcgagc aaggcgcagctgaactacacgcattatctgaagcagcagaggagcgcctatgccgtatac tatttcctcatggagcagctgcagctctatggccagatcacgcgcacacagctattccac gcctgcgagacggccacacagctggcgttgcagcatgccggcgatgaggagctcgtgacg cactgcgtcgcctgctgtgaaatgttggactttgatacgcaaacgctgcgcagttttcta catctgcagcgcctgctgccggcaacaggcgtctccggcggctacacgagccaactgcag cactgggatcaggcgctggtccagcaactggtggccacgcccgagcagtttccactggag tcgtatcaggccctgatgcggctggcggcgcgcaacgtccaaggcaaatggccctcggcg ctgttgcaacactttgcggcacgcaacgattggtggcagctgctgctgctcttccagtac ttcgatctgccgctcagcgcgctgaagcagctgctgccgcacttcaagtgcggcacgctg ggcgtgcatctgctgcgggcgctcagctacgactgcatccatgaacggcaacataagcgc gccggcaatcgtcgcagcgatggacaaaccaattcctcgcaagaaactatgaccaactcg tcgcacagctctggactagatgccaatctgcagcagctgcagcgcgatgccggccagtcg ctgtgcagcctgctcacgcacaatgcacagcaggatttgtttgccctggtgctctgcagc agcaacagcctgccggaggagaccatcggcagcatggccagattcatggagcttatgcag agcagcgcacagcactgcagcagcattaatctgctcaagcattgcgtgcgccagcagatg cccgtgctggccgtgctcgcggcgacattgggcgagcacaatcgcgactggtgctggctg ctctggctagccgtggccagtggccagtggctgcagttgctccaggcggccaccaagtcc aaggagccgcagcagcaaacggagctcgtttggctggtaatacgtggcgctgtcagcggg ggtcagttgaatgcgctcctgcacagcttctgcatctttcagccgcactgcaaaatcgtg cacctgtgtcacttcctgcaattaactgcgcagcagcaggacttcagcgacgcgaccatt gtggagctgcgtcaattcttctgcagctggagccaggacgcagtgcagctgccgctctgt gagccattggcgcgcaaacagctgctgcagcgctgcattggactgctgctcattcagctc gaagccaacttcgactgcattatgcagcagcaaaagtttctcgactgcatctgccgctcg gatgtgggcgacatttgcgatctgctggacttttgtctgctgcatcgcatatttggcgtg gcagcgccttggctgcgtcaactgggcatcaactacgagcagctggtgcggcgggacagc gccgaatacaaacgtctggtggatgcgctgacggaggccaaggcctatgagcaggcgctg cagctggcgtcgctgctgcagctgccgctggcggacattgtctatgccaagtggctggcc gagctggaggcgggtcagctgcgtctgcacgcggagtacgagcaggagattgcacagcat gccctgcccccggccatattggtcaactttctgttgcaggctgccgcccagcagccggag tcgcagctgcggcgtcgttacgagctgttgcagagcgcgctgggcgtcatcaaacagcac catttgtttcccaacgaatgcttcgaccgggatcagattgagtacgatatggtcttgtgc tatttgcagctggagcaggagcagctcacgatcgtggacatctatcattccgagtacttt gagcagataatgcgacaggagcgctgcgttctttacaaatccttctcagagcttaaggaa ctggcgggtatcgatgatctcagcatagccagtaaatcccagctgacaggtgagatggag cagcggctagatgcgctgctcaacatgctgctggacgagggcgatattgtggaggcactg cgtctgcaggagctgttcgagtttcgacccaatgatctgcgcttcattgtgttcgccatg gccctggccgagggcatgaccagcatagcgaatctgtccagcaaggagcgtcagctgcta agcgacatcgagaagagcgcctttcccaagttcaatcgactgacgctcaaccagagtccc atgaccagatgcagcagcgatttgtccggcagctgttccacgctcgagttcgaggagatt ccatcgaaggagaaacaacaaacactggaaacactgctgggcattggctccaagctgaag cacggcgtcgagctgggccggcgtattgtgctggcctatcgcgcggccatgtatctggac aaggagtatttggatgtgctgcgcaccaaggacgtcagcgtgctgctcaagagcgccgcc gaggaggattgcctgcagcgtctgttggtggtcagcgatatacacatctccacgcgactg acaccacaggagattgccgactctttggccctggagctgaccacttgcattgtgcgtcca cgtttctatatattccatgccagccaacagccacgcaatgcgccgcgcaacgccgatctc tggggacacaatattgatcgggattttcaccttttcctggagctaacgcccaatacgacg ctgctgggcaactgtctactcgagtactgtgatgcactgaaggcctacaggcgctaccaa gacaacaagccctacgagcagagcacggcctttgaacgtctctccgggattattacactc tatggcctgcccaacagcggcagcagcagcagcaatgtgcctggctcaccgggcataccc caagtgctgtcgcacaagaaacagaatcaaatctatgtggagctgctgatcaaggcgcat ttgtgttttgtgcacgagtgctccatggagggcattgccagtgtgctggagcgcgccaag ctgctcaacgcacagctgaccaacgccaagtcctggtcgcttattgtgcgcctgctgatt gggattgcgcgctatcgtgagatgttctactgcttcgatgcgctcatcgaaaacgagcag ttcgaatcgctactgggccagttcgacgaggatcagaagagcggtctgcggcaagccatc ttgggctatctgcgcgagtacaatcccaaaaatggcaaggatctgctacgtctggccgcg catcatttcctaatgtacaaagagctggcggagatgtggtcgcaggaggcgcaaggtatc ctggatagagtgcgctcggcagcatcaactgcagccgagccaagcaagctcaaggttagc ctggagctgcaacagcagctgcaacaggcgctggagtttttcacgcatgccaccgagaac tatttgctggacaacaagctgatactcgctcagcagagcgtggcgcgcgccgaactggtg gccatgcagctggatttgtgcaacaaagcgctggagaagcgcggcagtggaccagctggt gttggcacaagcagcacggcgccgctttgcatcagcgtgattggcgtgcaaacacgagag caattccgcgagctgatcaacaaccacttaagagtaccccaaaccctgatactgagtcgc gcctatggtcacgatgtcaactggagcgaagctttgctaactcagtttgtgttgcttcaa agacgcagctatctgcaggattaccgcggccatcaacgcatcaatgacaatgtcattgag caggttgtcaaggggtatatattgcacactcagaacaatccatcgagtgccaaacacgag gaatctctggctcagctggtggagctcattcgctccgtcaccctcaaatacaaattggca tccattttgggcctgaagggaattgtgatggcgctgataaacgactccacggtacactat ttgcgcgacacgaactttggacgcaatgaaatgcacaacgtaacgaatatgtga

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