Drosophila virilis: 6627316
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Entry
6627316 CDS
T01066
Symbol
Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6627316 (Prp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6627316 (Prp40)
Spliceosome [BR:
dvi03041
]
Complex A
U1 snRNP components
U1 related factors
6627316 (Prp40)
Complex B
6627316 (Prp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
6627316
NCBI-ProteinID:
XP_002051692
UniProt:
B4LT16
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All DBs
Position
4:complement(16097230..16100536)
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AA seq
822 aa
AA seq
DB search
MNVPPSAGNGNAAMPMPPAAAMGGMGYTHTPGMVPVPPFNLPPPGFGAPPPPELAAAFGA
LASNTEWTEHKAPDGRPYYYNQNTKQSSWEKPEALMTPAELLHNQCPWKEYRSDANKVYY
HNVTTKETCWEPPPEYLDMKAKAKAEEAAAAAKAVAAMTSSSLAGMVPHVALANILPAAL
PTAPRIPTPEIHSPLTPSSNENSSSAMDQAMAATLASIEVPQQNAKKEEKSSGENNTLVF
KDKREAIEAFKELLRDRNVPSTANWDQCVKIISKDPRYNAFKTLNERKQTFNAYKTQKLK
DEREESRLRAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFANNRTWTTVPEQDRRDIYED
CIFNLAKREKEEARVLKKRNMKVLGELLESMTSITYASTWSEAQVMLLDNAAFKNDVTLL
GMDKEDALIVFEEHIRTLEKEEEEDREREKKRLKRQQRKNRDGFLALLDSLHEEGKLTSM
SLWVELYPIISADIRFSAMLGQSGSTPLDLFKFYVENLKARFHDEKKIIREILKEKQFVV
QAKTSFEDFATVVCEDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLENEI
KNEWLEANVSVGEPYESAKKLVEHLEAFALYEKEIGVEKVWEDFIKESEDACSHHHSRSR
KSKKNKKHKKRVRSTSRSDIENELVELEKSRKRRSKSRSNSLSSIGSIESEKLLKKKKKR
KNKSRASSCESEMGNQTPITAAALQQNDSNSHSPAKKKKKEKRTKKDKEAKRHRNNRSTT
PLSPAAQSDSATSRNEELTLSDGELESKRAALLAQLNEQLDE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcctcctagcgctggcaatggcaatgcagcgatgccgatgccgccagccgcc
gcaatgggcggcatgggatacacgcacacgccgggaatggtgccagtgccaccattcaat
ctgccgccgcccggctttggtgcaccgccgccaccggagctagcagccgcatttggtgcc
ctcgcctcaaatacggagtggaccgagcataaagcgccggatggacgaccgtattattat
aatcaaaatacaaagcagagttcatgggaaaagccggaggcgctaatgacgccagctgag
ctactgcacaatcagtgcccctggaaagagtatcgctcagatgcaaacaaagtgtattat
cataatgtgactacgaaggagacgtgctgggagccaccgccagagtatcttgacatgaag
gccaaagccaaggcggaggaagcagccgctgcggctaaagccgttgccgccatgacatcc
tcgagcttagcaggtatggttccgcatgttgcattggccaatattctgccagctgcgttg
cccacagcgccgcgcatacccacgcctgagatacactcacccctgacgccaagcagtaat
gaaaatagctcctcagcaatggatcaggcaatggcagccactctagcgtccatcgaggtg
ccacaacagaatgctaaaaaggaggagaaatctagtggcgagaacaatacgctggttttt
aaagacaagcgcgaggccattgaggcgttcaaggagctcctgcgtgatcgaaatgtgccc
tcaactgcgaactgggatcagtgcgtcaagattatatcaaaggatccgcgttacaatgcc
ttcaaaacgctaaacgaacgcaaacaaacttttaatgcatacaaaacacaaaagctgaaa
gatgaacgcgaggagtcgagattgcgtgccaaaaaggctaaggaggatttggaacagttt
ctcatgtccagcgataagatgaactcacaaatgaaatattttcgttgcgaggaagttttt
gcgaacaatcgcacgtggacaacggtaccagaacaggatcgaagagatatctacgaggat
tgcatctttaatttggccaagcgtgagaaggaagaggctcgtgtgctcaagaaacgcaat
atgaaagtacttggtgagttgctagaatcaatgacatccattacgtacgctagcacgtgg
tcggaggcgcaggtaatgttgctggacaatgcggcgtttaaaaacgatgtcactctactc
ggcatggacaaggaggatgcgcttatcgtatttgaggagcatatccgcacgcttgagaag
gaggaagaggaggatcgagaacgggaaaagaaacgtttaaaacgacagcaacgcaagaat
cgtgatggcttcctcgcattacttgactcgctgcatgaggagggcaaactcacctctatg
tctttgtgggtggaactgtatccaattatatcggcggatatacgtttctctgctatgctg
ggtcagagtggctccacgccacttgatcttttcaagttctatgttgagaatttgaaggca
cgtttccatgacgaaaagaagatcatacgggaaatactcaaagagaagcagtttgttgtc
caggcgaagacatcttttgaggactttgccaccgttgtgtgcgaagataaacgctccgcc
agcctggatgccggtaatgtaaagttaacttacaactcgctgctagaaaaggcggaagcc
attgaaaaggagcgcatgaaggaggaggtgcggcgcttgcgaaaattggaaaatgaaatc
aaaaatgaatggttggaggcaaatgtgtccgtgggcgaaccctatgagagcgccaaaaag
ctggtcgagcatttagaggcgtttgcgctgtacgaaaaagaaattggagtggaaaaggtc
tgggaagattttatcaaagagagtgaagatgcctgcagccatcatcattcgcgttcacgt
aaatcgaaaaagaataaaaagcataaaaaacgtgtccgctcaacctctagatcagatatc
gagaacgagctggttgagctggaaaagtccagaaagcgacgctcaaaatctcgctcaaat
tctcttagttcaattggcagcattgagagtgaaaagctgttaaaaaagaagaaaaagcgc
aaaaacaaatcgagagcgtcgtcttgcgaatccgaaatgggcaatcaaacgccaattact
gctgctgcactgcagcagaacgactcaaattcgcactcaccggccaaaaagaagaaaaaa
gagaagcgcaccaaaaaggacaaagaagccaaacggcatagaaataatcgatccacaacg
ccgctcagtcctgcagctcaatcggattcagcgacatccagaaatgaggagctaacgctt
agcgatggtgaacttgaatccaaacgtgcagcgctgctagctcagcttaatgaacaactg
gacgaatga
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