KEGG   Drosophila virilis: 6627753
Entry
6627753           CDS       T01066                                 
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
dvi  Drosophila virilis
Pathway
dvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    6627753 (Csl4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dvi03019]
    6627753 (Csl4)
Messenger RNA biogenesis [BR:dvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     6627753 (Csl4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     6627753 (Csl4)
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 6627753
NCBI-ProteinID: XP_032293389
LinkDB
Position
4:complement(22336415..22338237)
AA seq 214 aa
MTAEGRITATTSHNEDEILICLPGERLCRVEDNIIVGQGTYEQGGYIYACKSGIVHIDET
TEKCQIVSVHKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVGNVLLESSYRGLLRKE
DVRETEKDRVDIYKSFKPGDVILARVVNQMEQSFMLSTAEAELGVVVAYASDIRKNRIPM
VPIGWGEMQCPQTTIKEPRKVAKVLPESSIKSDK
NT seq 645 nt   +upstreamnt  +downstreamnt
atgactgcggagggtagaatcacagctactacatctcataatgaggatgagatattaatt
tgcctgcctggagagcgcttatgtcgcgtggaggataacattatcgtgggacaaggtacc
tacgagcagggaggctacatttatgcctgcaaatctggaatagtgcatattgacgagacc
acggaaaagtgccaaattgtaagtgtgcacaagccaggctttcatttgaccataccggct
accggagatgtcgtcacagcacgcgtccttgtgacgacgcccaaattcgcaaagtgtgcc
atattttgcgtgggaaacgttctactcgagagcagttatcgcggtctgctgcgcaaggag
gacgtgcgcgaaactgaaaaagaccgagtggatatttacaagtcattcaaacccggtgat
gtcatattggcgcgtgttgttaaccagatggaacaatcgttcatgctgagcacagcagaa
gcagaactcggtgtggtggttgcgtatgccagcgatatccgaaaaaatcgtattcccatg
gtgcctattggctggggtgagatgcagtgcccgcagacaacgatcaaggagccaagaaag
gtggcaaaagtactgccagaaagttcaatcaaatctgataaataa

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