Drosophila virilis: 6628034
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Entry
6628034 CDS
T01066
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dvi
Drosophila virilis
Pathway
dvi03013
Nucleocytoplasmic transport
dvi03015
mRNA surveillance pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6628034 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
6628034 (Hel25E)
03015 mRNA surveillance pathway
6628034 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6628034 (Hel25E)
03041 Spliceosome [BR:
dvi03041
]
6628034 (Hel25E)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6628034 (Hel25E)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6628034 (Hel25E)
Spliceosome [BR:
dvi03041
]
Complex C
Other components
EJC/TREX
6628034 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
6628034 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
6628034
NCBI-ProteinID:
XP_002052911
UniProt:
B4LU13
LinkDB
All DBs
Position
4:complement(3224701..3227812)
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AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQNETTAVENQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTR
ELAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKNGTPHIVVGTPGRILALIRNK
KLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVAL
AQLLTEQNFPAIGIHRGMNQDERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgacgatcttctcgattacgaggatgaggagcagaacgagaccactgcc
gttgagaaccaggaggcaccaaagaaagatgttaagggtacttatgtatccatacacagt
tccggtttccgtgactttttgttaaagcccgaaatattgcgtgcaatcgttgactgcggt
tttgaacatccatccgaggtgcagcacgaatgcataccgcaggctgtgctcggcatggat
atcctgtgccaagccaagtccggtatgggcaaaacggctgtctttgtgcttgccacgctg
caacagctggagccatccgataataacacctgccacgtcctggtcatgtgccatacacgt
gaactggcattccaaataagcaaggagtacgaacgtttctccaagtatatgcccacagta
aaggtggctgtatttttcggcggtctggcaattcaaaaggacgaggagactctaaagaac
ggcacaccccacattgttgttggcacacctggacgtattttggcactcatacgcaacaag
aagctcaacctgaagcatttgaagcactttgttctggacgaatgtgacaagatgttagag
cagctggatatgcgtcgggacgtgcaggagattttccgtagcacaccacatggcaaacaa
gttatgatgttttccgccactttgagcaaagagattcgtcctgtttgcaaaaagtttatg
caagatcccatggaggtgtacgtcgatgatgaggccaaactgacactgcacggcctgcag
cagcactatgtcaatcttaaggagaacgagaagaacaagaagctgttcgaattgctcgat
gtgctcgagtttaatcaagttgtcatctttgtgaagtctgtgcaacgttgtgtggccttg
gcgcagctgctgaccgaacaaaactttccggccattggcattcatcgcggcatgaatcag
gatgagcgtttgaatcgttatcaacaattcaaagatttccagaagcgcatcctggttgcc
acaaatctctttggacgcggcatggacattgagcgtgtgaatattgtatttaactatgac
atgcccgaggattcggatacatatctgcatcgtgtggcacgtgctggtcgttttggtacc
aaaggcctggccattacctttgtctccgacgagaacgatgctaagatacttaacgaagta
caggatcgtttcgacgtcaacattagcgagctgccagaggaaattgatttgtccacatac
attgagggacgctag
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