Drosophila virilis: 6628195 Help Entry 6628195           CDS       T01066                                  Symbol Sf3b1 Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism dvi  Drosophila virilis Pathway dvi03040   Spliceosome Brite KEGG Orthology (KO) [BR:dvi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6628195 (Sf3b1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:dvi03041]     6628195 (Sf3b1)    03036 Chromosome and associated proteins [BR:dvi03036]     6628195 (Sf3b1) Spliceosome [BR:dvi03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     6628195 (Sf3b1)  Complex B     6628195 (Sf3b1)  Complex C    U2 SnRNP specific factors     6628195 (Sf3b1) Chromosome and associated proteins [BR:dvi03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     6628195 (Sf3b1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME DUF2298 Motif Other DBs NCBI-GeneID:  6628195 NCBI-ProteinID:  XP_002052854 UniProt:  B4LTN6 LinkDB All DBs Position 4:complement(3923901..3928334) Genome browser AA seq 1334 aa AA seqDB search MENIPRTHEDIEAQISDIQAKKTELAKSNAAAAGVGLLDSGGFFDADLYDEEAAVGKGAK SRYEGYNTSIAANDEDGDEDEEDDGFPVPQKRTTYTAPTSVLKDVTQGKEDVDPMAEHRR PTIADREDEYRQKRRRIIISPDRADPFADGGKTPDVGSRTYTDIMREQMLKGEESELRRR ILEKSKEGTLVKSSNGESAAKDGGRKRGRWDQTVSDSFIPAKVAATPSSAATPTWEDKTP GDHRWDETPGHKGSETPGATPGLGTRIWDATPAHAMTPGHETPGHEKSARRNRWDETPKT ERETPGHSGWAETPKPDRSGSGAGESISIESTPGGASKRRSRWDETPSNATPAGITPSNA SAMTPSMTPHATPGHATPLLTPGGSTPVGVKAMAMATPTPGALAAMTPEQLQAYRWEKEI DERNRPYTDEELDQMFPPGYKILPPPAGYVPLRTPGRKLMATPTPIAGTPAGFFIQVEDK NAKFMDNQPKGQNLPFMKPEDAQYFDKLLVDVNEDALSPEELKERKIMKLLLTIKNGSPP MRKSALRQMTDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPF VHKILVVIEPLLIDEDYYARIEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTAR AFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKALVEII EHGLVDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAI GYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKEEI LPHFFKFFWNHRMALDRRNYRQLVDTTVEIANKVGTSEIINRVVDDLKDENEQYRKMVME TVEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLP QICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVL GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYV SAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRV CTTVAIAIVAETCRPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVC PLLEDALMDRDLVHRQTACSAIKHMSLGVYGFGCEDALTHLLNYVWPNIFETSPHLVQAF MDSVDGLRVSLGSIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALIAGYPRITND PKNQYERYELDYTL NT seq 4005 nt NT seq  +upstreamnt  +downstreamnt atggaaaatattccgcgtactcatgaagacattgaggcgcaaatttcggatatacaggcc aagaagacagagcttgccaagagcaatgcagcggcagccggcgttgggctgctggacagc ggcggcttcttcgacgccgatctctacgacgaagaggcggctgtgggcaagggggccaag agtcgctacgagggctacaacacatccattgcggccaacgatgaggatggcgatgaagat gaggaagacgatggctttccagtgccgcagaagcgtaccacatacacggcgcccacgtct gtgctgaaggatgtgacccaaggcaaggaggacgttgatcccatggccgaacaccggcga ccgaccatagcggatcgcgaggatgagtacagacaaaagcggcgccgcattataatttcg ccggatcgtgccgatccattcgccgatggcggcaaaaccccggatgtaggctcccgcacc tatacagacatcatgcgcgagcagatgctgaagggcgaggaatccgagctgcgtcgtcgc atcttggagaagtccaaggagggtacattggtgaaatcctcgaatggcgaatctgctgcc aaggacggaggacgcaagcgtggacgctgggatcagacggtcagcgatagttttataccc gccaaagtggcagctacgcccagcagcgctgcaacgcccacctgggaagacaaaacgccc ggagatcatcgctgggatgagactcccggccataagggcagcgaaacgcctggtgcgacg cctggtctgggcactcgcatatgggatgcaacaccggcgcacgccatgacacctggccac gaaacgcccggtcatgagaagtcggcgcgtagaaatcgctgggacgagacaccaaagacg gagcgtgaaacgcccgggcacagcggctgggcagagaccccgaagccggatcgcagtggc agcggcgccggcgagagcatttccatagagtctaccccgggcggcgcctcgaagcgtcgc tcgcgctgggatgagacgccctcgaatgcgacgccggctgggataacgcccagcaatgcc agtgctatgacgcccagcatgacccctcatgcaacacctggacatgccacgcccttatta acacccggcggcagtacgcccgtgggcgtaaaggcaatggccatggccacacccacaccg ggcgcactggctgccatgacgccggaacaattgcaagcgtatcgctgggaaaaggaaatc gatgagcgcaacagaccctacaccgacgaggagctggatcaaatgtttccgccaggctat aaaatattgccgccgcccgccggctacgtgccgctgcgcacgcctggtcgcaagctaatg gcgacgcccacaccgattgcgggcacgcccgcaggcttctttatccaggtggaggataag aatgccaaatttatggacaaccagccaaaaggccagaatctgccgttcatgaagcccgag gatgcacaatactttgacaagctgcttgtggatgttaatgaggatgcgctctcgcccgaa gagctcaaggagcgcaagatcatgaaactcttgctgaccattaagaacggatcgccaccc atgcgcaaatcggcgctgcgtcagatgacggacaaggcgcgtgaatttggcgccgggccg ctattcaatcaaatcctaccgctgctcatgtcaccgacgctggaggatcaggaacggcat ttgctggtgaaagtcatcgatcgtgtgctgtacaaactggatgatctggtgcgtccattt gtgcacaagatattggtggtcattgagccgctactcatcgatgaggattactatgcgcgc atcgagggtcgggagattatatcgaatctggcaaaggcagccggtttggccaccatgatc tccaccatgcgtccggatattgataatattgatgagtacgtcagaaatacgacagcgcgt gcctttgccgtggtcgcctccgccttgggcataccctcgctgttgcccttcctgaaggcc gtgtgcaagtccaagaaatcctggcaagcgcgccacacaggcatcaagattgtgcaacag attgccatactgatgggctgcgccatattgccccatctgaaggcgctggtggagatcatt gagcacggcttggtcgatgagcagcaaaaggtgcgcaccattacagcgctggccatcgca gccttggccgaggcggccacaccctatggcattgaatccttcgactcggtgctcaagccg ctctggaagggcatacggacgcatcgtggcaagggcctggccgcgttcctcaaggccatt ggctatctcataccgctgatggatgccgagtatgccaactactatacacgtgaggtcatg ctgattctcatacgtgaattccagtcgcccgatgaggagatgaagaagattgtcctcaag gtcgtaaaacaatgttgcgccacggatggtgtggagccgcagtatatcaaggaggagata ttgccgcactttttcaagttcttttggaatcatcgcatggcactggacagacgcaactat cgccagctggtcgataccaccgtggagatcgctaacaaggtgggcacctcggagattatc aatcgtgtcgtggacgatctgaaagatgagaatgaacagtatcgcaaaatggtcatggaa acggtggagaaaattatgggcaatctgggcgcagcggatattgattcgcgcctcgaggag cagctgattgatggcatactgtatgccttccaggagcagaccaccgaggatgtagtcatg ctgaacggattcggcaccattgttaatcagctgggcaaacgtgtcaagccctatttgcca cagatttgcggcaccatactctggcgtctgaacaacaaatccgccaaggtgcgtcaacag gcggcggatctgatctcgcgcattgccgtggtcatgaagacctgccaggaggagaagctg atgggccatttgggcgttgtgctctacgagtatttgggcgaggagtatccggaggtgttg ggcagcatattgggtgcgctcaaggctattgtaaatgtcattggcatgaccaagatgacg ccgcccatcaaagatctgttgccccgccttacgcctatattgaagaaccggcacgagaag gtgcaggagaactgcattgatctggtgggtcgcattgctgatcgcggaccggaatatgtg tccgcccgtgaatggatgcgcatctgctttgaattgctggagctgctcaaggcgcacaag aaggccatacggcgcgccacggtgaatacatttggctacatagccaaggcaattggtccg cacgatgtgctggccacgcttttgaataacctaaaggtacaggagcgtcagaatcgtgtc tgcaccaccgtcgccattgccattgtcgccgagacatgtcgtccgttcaccgtgctccca gcgctgatgaatgagtaccgtgtgccggagctgaatgtacagaatggcgtactgaaatct ctatcctttctgttcgagtacattggcgaaatgggcaaggactatatctatgcggtgtgc ccgctgctcgaggatgcgctaatggatcgcgatctagtgcatcgccagacggcctgttcg gccatcaagcacatgtcgctgggcgtctatggatttggctgcgaggacgcactcacgcat ctgctcaattatgtgtggcccaacatatttgagacatcgccgcatctggtgcaggccttc atggactcggtggatggactgcgtgtctcgttgggctccatcaagattctgcaatacacg ctccagggtctgttccatccggcgcgtaaggtgcgcgatgtctactggaagatttacaat tcgctgtatattggcggccaggatgcgctcattgcagggtatccacgcatcaccaacgat cccaagaaccagtacgagcgctacgagctggactatacgctttaa

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