Drosophila virilis: 6628636
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Entry
6628636 CDS
T01066
Symbol
U2af38
Name
(RefSeq) splicing factor U2af 38 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
dvi
Drosophila virilis
Pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6628636 (U2af38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6628636 (U2af38)
Spliceosome [BR:
dvi03041
]
Complex A
U2 snRNP components
U2 related factors
6628636 (U2af38)
Complex B
6628636 (U2af38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
6628636
NCBI-ProteinID:
XP_032293936
LinkDB
All DBs
Position
4:complement(14366009..14367449)
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AA seq
285 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK
SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR
NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS
RELRRYLYSRRRRNRSRSRSRSGGPRRRSRSRSPRRRREERGIGGGTDRGGERGIVGGTD
RGGERGIGGGTDRGDRNDRDGNDRDRRKGGGGGGGGGGGGGGGRY
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatatttggcatctattttcggcacagaaaaggacaaagtcaactgctcgttt
tactttaaaatcggagcgtgccggcatggcgaccgctgttcacgcatacacaacaagccg
acattttcgcaaacggtgctgctgcagaatctgtacgtgaatccgcagaactcggctaaa
tcggcggatggctcacatttggttgcgaacgtttcggacgaggagatgcaggagcattat
gacaatttctttgaggatgtgttcgttgagtgcgaggacaagtacggagaaattgaggag
atgaacgtgtgcgacaatttgggcgaccatctagtcggcaatgtgtacatcaaattccgc
aatgaggccgacgccgagaaggcggcaaatgatttgaacaatcgctggtttggtggacga
cccgtctattcggaactgtcgccggtcaccgatttccgtgaggcctgctgcagacagtac
gaaatgggcgaatgcacaagatccggcttttgcaattttatgcacctgaagcccatatca
agagagttgcggaggtacctatactcgcgtcggcgtcgcaatcgttcgcgttcacgttcc
cgttccggtggaccgcggcgtcgctcgcgcagtcgttcgccgcgccgtcgacgcgaggag
cgcggcatcggcggcggcacagaccgtggcggcgagcgtggcattgtcggtggcactgat
cgtggtggcgagcgaggcattggtggcggcaccgatcgaggagatcgcaacgatcgcgat
ggcaatgatcgtgatagacgcaaaggtggtggtggtggcgggggaggaggaggaggaggc
ggcggcggtcgatattaa
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