Drosophila virilis: 6628673
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Entry
6628673 CDS
T01066
Symbol
vkg
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
dvi
Drosophila virilis
Pathway
dvi04382
Cornified envelope formation
dvi04512
ECM-receptor interaction
dvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6628673 (vkg)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6628673 (vkg)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
6628673 (vkg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvi04147
]
6628673 (vkg)
00536 Glycosaminoglycan binding proteins [BR:
dvi00536
]
6628673 (vkg)
Exosome [BR:
dvi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
6628673 (vkg)
Glycosaminoglycan binding proteins [BR:
dvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6628673 (vkg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Serglycin
Motif
Other DBs
NCBI-GeneID:
6628673
NCBI-ProteinID:
XP_002051847
UniProt:
B4LTV1
LinkDB
All DBs
Position
4:14595646..14616578
Genome browser
AA seq
1840 aa
AA seq
DB search
MMLPRDLAGLSGVLGAVYLFASVVSFAAAKECNTTLCDCKGIKGRMGDLGLKGVPGREGA
PGDMGPFGPPGRFGEKGDFGEYGEQGEKGHRGDAGPQGETGFPGARGFPGDDGTPGPRGI
DGCDGRPGAQGDAGKPGENGARGPMGKPGSPGAPGDAGEGGINSKGTKGNRGELGPDGTD
GQPGFGGATGHKGDIGFAGIEGRKGEQGPQGYKGEMGVPESYPMLQGVMGDKGEPGEGEP
GALRYDETLKGYKGYAGPRGERGPPGIFGEPGQFGRDGLPGARGDHGERGDRGKPGRDGP
QGGPGDKGVKGAPGYNGEDGEDGRPGERGEDGFDGMPGIQGPVGPPGIYDPTLDRSLPGP
IGPQGDIGPVGNPGLNGIPGKQGRRGPQGPPGPPGDEGLSGNRGPPGRSEKGEEGDYGLM
GPPGPQGAPGVAGPPGRTGYQGSPGLNLYGPKGQAGQNGIPGVDGYRGDRGDVGLPGDKG
LPGEGLNIVGPPGSQGPPGRRGRPGIDGRPGLRGFPGDKGIRGDDCGVCHAGPRGLKGLM
GDAGYPGEHGARGMSGITGARGPKGVRGKPGLRGFKGMKGSAGIPGEVGRPGKQGPPGII
EYSGSQKVTEKGDDGDNGRRGEQGAQGDRGEDGWNGISGAKGEPGLRGDFGDAGRPGLDG
APGINGRDGKPGAPPTTPKFYLTGEPGYNGKKGAPGDVGSVGLKGDKGEPHPGEIIENRG
EPGDVGYPGEPGFRGPKGEAGEPGLKGIMGDMGIPGEVFVGPPGAKGYKGENGDYGLHGL
TGKPGRDGEPGLPGVIGPKGFRGEPGQYILPGEIGVSGRPGIKGIIGDEGPIGYPGPRGR
PGPKGSKGVTGDDGLMGLKGLPGNKGQRGDIVVGPPGRQGEPGRSGSVALHGVKGQKGEV
GYPGQFGQNGAKGSIGYPGRAGRVGDPGPAGYPGEPGPSGLAGIPGEQGDRGDIGFDGRT
GDLGPRGAVGDFGPKGLTGDIGPFGYPGVPGMPGIKGEQGEQGVSGRRGAKGVSAYSGIK
GDQGDAGWQGPPGFNGAPGFKGERGAPGDSLPASDGLPGFKGEVGAPGRNGLPGLHGLKG
ARGEIGFYGQPGMIGDEGDDGIPGYPGRHGAAGLKGEAGQVGPMGSPGDFGDIGDVGYPG
APGLQGDEGLPGEYGPSGNTGETGERGDIGDVGEVLYLGNIEDTRGETGDHGLTGETGPT
GEPGMVGAAGYRGARGQPGDIGFGGQPGFDGQPGPKGIQGDKGLRGVPGARLVAERGDEG
DQGYDGLAGRPGRYGQKGAPGEQGEYGLNGAIGPQGPVRIGPAGPPGDFGYPGPPGRNGL
HGLTGPKGERGNTGRKGEQGEAGFAIWGRQGDTGDRGEQGALGYDGAKGEQGFSGRPGRT
GFIGPRGPRGPTGDAGWSGIDGVDGLSGQKGEAGVTYSYTYARPGDRGEPGLDGFKGEQG
DIGAPGLLGAIGLRGVAGYRGDAGEMGYQGPDGIQGQRGDMGAIGLTGRVGAQGQTGAPG
DPAPPPPPPKSRGFIFTRHSQSVQIPVCPANTNMLWEGYSLSGNVASSRAVGQDLGQSGS
CLMRFTTMPYMFCDFNNVCNYAQNNDDSLWLSTAEPMPMSMTPIQSRDLMKYISRCVVCE
TSTRVIALHSQSMSIPDCPGGWEEMWSGYSYYMTTMDNTGGIGQNLVSPGSCLEEFRSNP
VIECHGHGRCNYYDALASFWLAVIEQQDQFVQPRQQTLKADQTSKISRCTVCRRRGDSFF
TVKRTSSTYSSGSGSGSGSGSSSWSSSSSAGARAPAPSPYSSWSGGYPSIDFRTAPQTVR
QPQPQPPPANYNRQPNYRNPYQYAGTRQYRRRPRDDTYAP
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcccagagatctagctggtctctcgggtgtgctaggcgcagtctatctgttt
gccagcgttgtgtcctttgcggcggcaaaggaatgcaacacaacgctgtgcgactgcaag
ggcatcaagggacgcatgggcgatcttggcttgaagggcgtgcccggacgtgagggtgcg
cccggcgatatgggtccgtttggaccgcccggacgtttcggggagaagggcgatttcggc
gaatacggcgaacagggcgaaaagggacatcggggtgatgctggaccgcagggcgagact
ggttttccgggcgcacgcggctttcccggcgacgatggcactcccggaccgcgcggcatc
gatggctgcgacggtcgtcccggtgctcagggcgatgctggtaagccgggtgaaaatggt
gctcgtggacccatgggcaagcccggttcgcctggcgcgccaggtgatgccggcgagggc
ggcatcaactccaagggcaccaagggtaatcgcggcgagctcggacccgatggcaccgat
ggtcagccaggttttggcggcgcaaccggacacaagggcgacattggcttcgccggcatt
gagggcagaaagggcgaacagggtcctcagggctacaagggtgaaatgggcgtgcctgag
agctatcccatgctgcagggcgtcatgggcgacaagggtgagcccggcgagggtgagccc
ggtgctctgcgctacgatgaaaccctgaagggctacaaaggctatgctgggccacgtggt
gagcgcggtccacccggcatattcggcgagccagggcaatttggacgcgatggcttgccg
ggcgcccgaggcgaccacggcgagcgcggcgaccgtggcaagcccggtcgtgatggtccc
caaggcggacccggtgataagggcgtgaaaggcgctccaggctacaatggcgaagatggc
gaagacggacggccgggtgagcgcggcgaggacggcttcgatggcatgcccggcattcag
ggtcccgtcggaccacccggtatttatgatcccaccttggataggtcgctgcccggcccg
attggaccgcagggtgacatcggacccgttggaaaccccggcttgaatggcattcccggc
aagcaaggacgtcgcggccctcagggtccgcccggcccgcccggagatgaaggtctcagt
ggcaaccgtggtccacccggacgcagcgagaaaggcgaggagggtgactacggcctgatg
ggtccacctggcccacaaggtgcacccggcgtggctggtcctccaggtcgcactggctac
caaggcagcccaggcctcaacctgtacggaccaaaaggtcaggctggccaaaatggaatt
cccggcgtagatggctatcgtggcgatcgtggagatgtcggcttgcccggtgacaagggc
ttgccaggtgaaggcttgaacattgttggaccacccggctctcagggtccgcccggtaga
cgtggcagacccggcattgacggtcgtcccggcctgcgaggcttccctggtgacaagggt
atacgaggcgatgactgtggcgtctgccatgccggaccgcgtggccttaagggcctcatg
ggcgatgctggctatccgggcgagcacggtgcacgcggcatgagcggcatcactggcgca
cgcggacccaagggtgtcaggggtaagcctggcttgcgaggatttaagggcatgaagggc
tcagccggtattcccggtgaggtgggtcgccccggcaagcagggtccacccggcataatc
gagtacagcggcagccaaaaggtgacagaaaagggcgacgatggcgacaatggacgacgc
ggcgaacaaggtgcccagggtgacaggggcgaggatggatggaacggcataagcggagcc
aagggtgaaccgggtcttcgtggagacttcggtgacgcaggtcgacccggattagacggc
gcaccaggtatcaatggccgcgacggtaaaccaggtgctccgccaaccacacccaagttc
tatttaaccggtgagcccggctacaatggcaaaaagggcgctcctggtgatgtgggcagt
gtgggtcttaagggtgacaagggtgagccacatccgggcgaaataattgagaaccgtggc
gagcctggagatgttggctatcccggcgagcctggcttccgcggaccaaagggcgaggct
ggcgagcccggccttaaaggcataatgggtgatatgggcattcccggcgaagtcttcgtg
ggaccacctggagccaagggctataagggcgagaatggcgactatggactacatggcctg
actggtaagcctggtagagacggtgagcccggcctgcctggcgtgatcggccccaaagga
ttccgtggtgagcctggccaatatattctgcctggagagatcggcgtatccggccgacct
ggtatcaagggcataattggtgacgagggaccaatcggctatcccggtcccaggggccga
cccggaccgaagggtagcaagggcgtgacaggtgatgacggtttgatgggcctgaaaggt
ctgcccggcaacaagggacagcgtggcgacattgtggttggacctcctggccgacagggt
gagcccggtcgctcgggcagcgtggccctgcacggtgtaaagggccaaaagggtgaggtc
ggctaccctggacaattcggccagaatggcgccaaaggcagcattggatacccaggacgc
gctggccgagttggcgatccaggtccagccggctaccccggcgaaccgggtccctctggt
ctggctggcattcccggcgaacagggtgatcgcggcgacattggatttgatggacgaact
ggcgatctgggtcctcgcggcgcagtcggtgatttcggtcctaaaggtcttaccggagat
atcggtccgttcggctaccccggtgtgcctggcatgcccggcatcaagggcgagcaaggt
gagcagggtgtgtcgggacgtcgcggtgccaagggtgtgtccgcctacagcggcattaag
ggtgatcagggtgatgccggctggcagggcccacctggtttcaacggagcacccggcttc
aagggtgagcgtggtgcaccaggtgattcactgcccgcttctgatggtctgccgggcttc
aagggcgaggttggtgcgcccggtcgcaacggattacccggcttgcatggtttgaaggga
gcacgtggcgagattggattctatggtcagcctggcatgatcggtgatgaaggcgatgat
ggtatccctggttaccccggtcgccatggagctgccggacttaagggcgaagccggtcaa
gtcggacccatgggctcacccggtgattttggagatatcggcgatgttggctatccaggc
gccccaggattgcagggcgacgaaggactgcctggtgaatatggtccaagcggcaatacg
ggtgaaaccggcgaaaggggtgacatcggtgatgttggtgaggttctctacctgggcaac
atagaagatacccgtggtgagaccggagatcatggactaactggcgagacaggcccgacg
ggagagcccggcatggtcggtgccgcgggctaccgtggtgcacgtggacagcccggtgac
attgggttcggaggtcagcctggatttgatggccagccaggacccaagggcatacagggc
gacaagggattgcggggcgttcccggtgcaagactcgttgccgaacgcggcgacgaaggt
gaccaaggatatgacggacttgccggacgtcctggacgctatggccagaagggagcacct
ggtgaacagggcgaatatggactaaacggcgcgatcggtccccagggtccagtgcgcatc
ggtcctgccggtccacccggcgattttggctatcccggaccacccggacgcaatggactg
cacggcctgactggaccaaagggcgagcgcggcaataccggccgaaagggcgaacagggt
gaagctggctttgccatctggggcagacaaggtgacacgggcgaccgaggtgagcagggt
gcactcggctatgatggcgccaagggcgaacaaggcttcagcggacgtcctggccgcacc
ggcttcattggtccgcgcggaccacgcggcccaactggcgacgccggctggagcggtatc
gacggcgtcgacggtctgtccggccaaaagggtgaagctggtgtcacctactcctacacg
tatgcccgtcccggggatcgtggcgagcccggcctagatggcttcaagggtgagcagggc
gacattggtgcacccggtctcctgggtgccatcggtctgcgcggcgttgccggatatcgt
ggtgatgctggtgagatgggctaccaaggtccagacggcattcaaggccaacgcggcgac
atgggtgcaattggcttgaccggacgcgtaggtgcacaaggtcagactggtgcgccgggt
gacccggcgccaccgccgccgccgcccaagagccgcggcttcattttcacccggcactcg
cagtctgtacagatacccgtctgcccggccaatacgaacatgctgtgggagggctactcg
ctctccggcaatgtggccagcagtcgcgccgtcggccaagatctgggccagtccggctcc
tgtctgatgcgcttcaccacgatgccgtacatgttctgcgacttcaacaatgtctgcaac
tatgcccagaacaacgacgacagcttgtggctgtccaccgcggagcctatgcccatgtcc
atgacgccgattcagtccagagacctcatgaagtacatttcccgctgcgtcgtgtgcgag
acctcaactcgagtcattgccctgcactcgcagtccatgtccataccggactgtcctggc
ggctgggaagagatgtggagcggctatagttactatatgactaccatggataacacgggc
ggcattggccaaaatctggtctcgcccggctcctgcttggaggagttccgttccaatccc
gtcatcgagtgccatggccatggacgctgcaattactacgatgcgctagcctccttctgg
ctggccgttatcgagcagcaggatcagtttgtgcagccgcgccagcaaacgctcaaggcc
gaccaaaccagcaagattagcagatgcactgtgtgtcgtcgtcgtggcgacagcttcttc
acagtcaaacggacttcctcaacatacagctccggctccggttccggctcgggctcgggc
tcgagctcttggtcatcgtcgtcttcggcaggagccagagcgccagcgccttccccctac
tccagctggtcgggtggctatccgagcatcgatttccgtacggcaccgcaaacagtacgc
cagccgcagccgcagccaccgccggccaactacaaccgtcagcccaactatcggaacccc
tatcaatacgccggcacgcgccaatatcgtcggcgtccgcgcgacgacacctacgctcct
tag
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