Drosophila virilis: 6628673
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Entry
6628673 CDS
T01066
Symbol
vkg
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
dvi
Drosophila virilis
Pathway
dvi04512
ECM-receptor interaction
dvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
6628673 (vkg)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
6628673 (vkg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dvi04147
]
6628673 (vkg)
00536 Glycosaminoglycan binding proteins [BR:
dvi00536
]
6628673 (vkg)
Exosome [BR:
dvi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
6628673 (vkg)
Glycosaminoglycan binding proteins [BR:
dvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
6628673 (vkg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Serglycin
Motif
Other DBs
NCBI-GeneID:
6628673
NCBI-ProteinID:
XP_002051847
UniProt:
B4LTV1
LinkDB
All DBs
Position
4:14595646..14616578
Genome browser
AA seq
1840 aa
AA seq
DB search
MMLPRDLAGLSGVLGAVYLFASVVSFAAAKECNTTLCDCKGIKGRMGDLGLKGVPGREGA
PGDMGPFGPPGRFGEKGDFGEYGEQGEKGHRGDAGPQGETGFPGARGFPGDDGTPGPRGI
DGCDGRPGAQGDAGKPGENGARGPMGKPGSPGAPGDAGEGGINSKGTKGNRGELGPDGTD
GQPGFGGATGHKGDIGFAGIEGRKGEQGPQGYKGEMGVPESYPMLQGVMGDKGEPGEGEP
GALRYDETLKGYKGYAGPRGERGPPGIFGEPGQFGRDGLPGARGDHGERGDRGKPGRDGP
QGGPGDKGVKGAPGYNGEDGEDGRPGERGEDGFDGMPGIQGPVGPPGIYDPTLDRSLPGP
IGPQGDIGPVGNPGLNGIPGKQGRRGPQGPPGPPGDEGLSGNRGPPGRSEKGEEGDYGLM
GPPGPQGAPGVAGPPGRTGYQGSPGLNLYGPKGQAGQNGIPGVDGYRGDRGDVGLPGDKG
LPGEGLNIVGPPGSQGPPGRRGRPGIDGRPGLRGFPGDKGIRGDDCGVCHAGPRGLKGLM
GDAGYPGEHGARGMSGITGARGPKGVRGKPGLRGFKGMKGSAGIPGEVGRPGKQGPPGII
EYSGSQKVTEKGDDGDNGRRGEQGAQGDRGEDGWNGISGAKGEPGLRGDFGDAGRPGLDG
APGINGRDGKPGAPPTTPKFYLTGEPGYNGKKGAPGDVGSVGLKGDKGEPHPGEIIENRG
EPGDVGYPGEPGFRGPKGEAGEPGLKGIMGDMGIPGEVFVGPPGAKGYKGENGDYGLHGL
TGKPGRDGEPGLPGVIGPKGFRGEPGQYILPGEIGVSGRPGIKGIIGDEGPIGYPGPRGR
PGPKGSKGVTGDDGLMGLKGLPGNKGQRGDIVVGPPGRQGEPGRSGSVALHGVKGQKGEV
GYPGQFGQNGAKGSIGYPGRAGRVGDPGPAGYPGEPGPSGLAGIPGEQGDRGDIGFDGRT
GDLGPRGAVGDFGPKGLTGDIGPFGYPGVPGMPGIKGEQGEQGVSGRRGAKGVSAYSGIK
GDQGDAGWQGPPGFNGAPGFKGERGAPGDSLPASDGLPGFKGEVGAPGRNGLPGLHGLKG
ARGEIGFYGQPGMIGDEGDDGIPGYPGRHGAAGLKGEAGQVGPMGSPGDFGDIGDVGYPG
APGLQGDEGLPGEYGPSGNTGETGERGDIGDVGEVLYLGNIEDTRGETGDHGLTGETGPT
GEPGMVGAAGYRGARGQPGDIGFGGQPGFDGQPGPKGIQGDKGLRGVPGARLVAERGDEG
DQGYDGLAGRPGRYGQKGAPGEQGEYGLNGAIGPQGPVRIGPAGPPGDFGYPGPPGRNGL
HGLTGPKGERGNTGRKGEQGEAGFAIWGRQGDTGDRGEQGALGYDGAKGEQGFSGRPGRT
GFIGPRGPRGPTGDAGWSGIDGVDGLSGQKGEAGVTYSYTYARPGDRGEPGLDGFKGEQG
DIGAPGLLGAIGLRGVAGYRGDAGEMGYQGPDGIQGQRGDMGAIGLTGRVGAQGQTGAPG
DPAPPPPPPKSRGFIFTRHSQSVQIPVCPANTNMLWEGYSLSGNVASSRAVGQDLGQSGS
CLMRFTTMPYMFCDFNNVCNYAQNNDDSLWLSTAEPMPMSMTPIQSRDLMKYISRCVVCE
TSTRVIALHSQSMSIPDCPGGWEEMWSGYSYYMTTMDNTGGIGQNLVSPGSCLEEFRSNP
VIECHGHGRCNYYDALASFWLAVIEQQDQFVQPRQQTLKADQTSKISRCTVCRRRGDSFF
TVKRTSSTYSSGSGSGSGSGSSSWSSSSSAGARAPAPSPYSSWSGGYPSIDFRTAPQTVR
QPQPQPPPANYNRQPNYRNPYQYAGTRQYRRRPRDDTYAP
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcccagagatctagctggtctctcgggtgtgctaggcgcagtctatctgttt
gccagcgttgtgtcctttgcggcggcaaaggaatgcaacacaacgctgtgcgactgcaag
ggcatcaagggacgcatgggcgatcttggcttgaagggcgtgcccggacgtgagggtgcg
cccggcgatatgggtccgtttggaccgcccggacgtttcggggagaagggcgatttcggc
gaatacggcgaacagggcgaaaagggacatcggggtgatgctggaccgcagggcgagact
ggttttccgggcgcacgcggctttcccggcgacgatggcactcccggaccgcgcggcatc
gatggctgcgacggtcgtcccggtgctcagggcgatgctggtaagccgggtgaaaatggt
gctcgtggacccatgggcaagcccggttcgcctggcgcgccaggtgatgccggcgagggc
ggcatcaactccaagggcaccaagggtaatcgcggcgagctcggacccgatggcaccgat
ggtcagccaggttttggcggcgcaaccggacacaagggcgacattggcttcgccggcatt
gagggcagaaagggcgaacagggtcctcagggctacaagggtgaaatgggcgtgcctgag
agctatcccatgctgcagggcgtcatgggcgacaagggtgagcccggcgagggtgagccc
ggtgctctgcgctacgatgaaaccctgaagggctacaaaggctatgctgggccacgtggt
gagcgcggtccacccggcatattcggcgagccagggcaatttggacgcgatggcttgccg
ggcgcccgaggcgaccacggcgagcgcggcgaccgtggcaagcccggtcgtgatggtccc
caaggcggacccggtgataagggcgtgaaaggcgctccaggctacaatggcgaagatggc
gaagacggacggccgggtgagcgcggcgaggacggcttcgatggcatgcccggcattcag
ggtcccgtcggaccacccggtatttatgatcccaccttggataggtcgctgcccggcccg
attggaccgcagggtgacatcggacccgttggaaaccccggcttgaatggcattcccggc
aagcaaggacgtcgcggccctcagggtccgcccggcccgcccggagatgaaggtctcagt
ggcaaccgtggtccacccggacgcagcgagaaaggcgaggagggtgactacggcctgatg
ggtccacctggcccacaaggtgcacccggcgtggctggtcctccaggtcgcactggctac
caaggcagcccaggcctcaacctgtacggaccaaaaggtcaggctggccaaaatggaatt
cccggcgtagatggctatcgtggcgatcgtggagatgtcggcttgcccggtgacaagggc
ttgccaggtgaaggcttgaacattgttggaccacccggctctcagggtccgcccggtaga
cgtggcagacccggcattgacggtcgtcccggcctgcgaggcttccctggtgacaagggt
atacgaggcgatgactgtggcgtctgccatgccggaccgcgtggccttaagggcctcatg
ggcgatgctggctatccgggcgagcacggtgcacgcggcatgagcggcatcactggcgca
cgcggacccaagggtgtcaggggtaagcctggcttgcgaggatttaagggcatgaagggc
tcagccggtattcccggtgaggtgggtcgccccggcaagcagggtccacccggcataatc
gagtacagcggcagccaaaaggtgacagaaaagggcgacgatggcgacaatggacgacgc
ggcgaacaaggtgcccagggtgacaggggcgaggatggatggaacggcataagcggagcc
aagggtgaaccgggtcttcgtggagacttcggtgacgcaggtcgacccggattagacggc
gcaccaggtatcaatggccgcgacggtaaaccaggtgctccgccaaccacacccaagttc
tatttaaccggtgagcccggctacaatggcaaaaagggcgctcctggtgatgtgggcagt
gtgggtcttaagggtgacaagggtgagccacatccgggcgaaataattgagaaccgtggc
gagcctggagatgttggctatcccggcgagcctggcttccgcggaccaaagggcgaggct
ggcgagcccggccttaaaggcataatgggtgatatgggcattcccggcgaagtcttcgtg
ggaccacctggagccaagggctataagggcgagaatggcgactatggactacatggcctg
actggtaagcctggtagagacggtgagcccggcctgcctggcgtgatcggccccaaagga
ttccgtggtgagcctggccaatatattctgcctggagagatcggcgtatccggccgacct
ggtatcaagggcataattggtgacgagggaccaatcggctatcccggtcccaggggccga
cccggaccgaagggtagcaagggcgtgacaggtgatgacggtttgatgggcctgaaaggt
ctgcccggcaacaagggacagcgtggcgacattgtggttggacctcctggccgacagggt
gagcccggtcgctcgggcagcgtggccctgcacggtgtaaagggccaaaagggtgaggtc
ggctaccctggacaattcggccagaatggcgccaaaggcagcattggatacccaggacgc
gctggccgagttggcgatccaggtccagccggctaccccggcgaaccgggtccctctggt
ctggctggcattcccggcgaacagggtgatcgcggcgacattggatttgatggacgaact
ggcgatctgggtcctcgcggcgcagtcggtgatttcggtcctaaaggtcttaccggagat
atcggtccgttcggctaccccggtgtgcctggcatgcccggcatcaagggcgagcaaggt
gagcagggtgtgtcgggacgtcgcggtgccaagggtgtgtccgcctacagcggcattaag
ggtgatcagggtgatgccggctggcagggcccacctggtttcaacggagcacccggcttc
aagggtgagcgtggtgcaccaggtgattcactgcccgcttctgatggtctgccgggcttc
aagggcgaggttggtgcgcccggtcgcaacggattacccggcttgcatggtttgaaggga
gcacgtggcgagattggattctatggtcagcctggcatgatcggtgatgaaggcgatgat
ggtatccctggttaccccggtcgccatggagctgccggacttaagggcgaagccggtcaa
gtcggacccatgggctcacccggtgattttggagatatcggcgatgttggctatccaggc
gccccaggattgcagggcgacgaaggactgcctggtgaatatggtccaagcggcaatacg
ggtgaaaccggcgaaaggggtgacatcggtgatgttggtgaggttctctacctgggcaac
atagaagatacccgtggtgagaccggagatcatggactaactggcgagacaggcccgacg
ggagagcccggcatggtcggtgccgcgggctaccgtggtgcacgtggacagcccggtgac
attgggttcggaggtcagcctggatttgatggccagccaggacccaagggcatacagggc
gacaagggattgcggggcgttcccggtgcaagactcgttgccgaacgcggcgacgaaggt
gaccaaggatatgacggacttgccggacgtcctggacgctatggccagaagggagcacct
ggtgaacagggcgaatatggactaaacggcgcgatcggtccccagggtccagtgcgcatc
ggtcctgccggtccacccggcgattttggctatcccggaccacccggacgcaatggactg
cacggcctgactggaccaaagggcgagcgcggcaataccggccgaaagggcgaacagggt
gaagctggctttgccatctggggcagacaaggtgacacgggcgaccgaggtgagcagggt
gcactcggctatgatggcgccaagggcgaacaaggcttcagcggacgtcctggccgcacc
ggcttcattggtccgcgcggaccacgcggcccaactggcgacgccggctggagcggtatc
gacggcgtcgacggtctgtccggccaaaagggtgaagctggtgtcacctactcctacacg
tatgcccgtcccggggatcgtggcgagcccggcctagatggcttcaagggtgagcagggc
gacattggtgcacccggtctcctgggtgccatcggtctgcgcggcgttgccggatatcgt
ggtgatgctggtgagatgggctaccaaggtccagacggcattcaaggccaacgcggcgac
atgggtgcaattggcttgaccggacgcgtaggtgcacaaggtcagactggtgcgccgggt
gacccggcgccaccgccgccgccgcccaagagccgcggcttcattttcacccggcactcg
cagtctgtacagatacccgtctgcccggccaatacgaacatgctgtgggagggctactcg
ctctccggcaatgtggccagcagtcgcgccgtcggccaagatctgggccagtccggctcc
tgtctgatgcgcttcaccacgatgccgtacatgttctgcgacttcaacaatgtctgcaac
tatgcccagaacaacgacgacagcttgtggctgtccaccgcggagcctatgcccatgtcc
atgacgccgattcagtccagagacctcatgaagtacatttcccgctgcgtcgtgtgcgag
acctcaactcgagtcattgccctgcactcgcagtccatgtccataccggactgtcctggc
ggctgggaagagatgtggagcggctatagttactatatgactaccatggataacacgggc
ggcattggccaaaatctggtctcgcccggctcctgcttggaggagttccgttccaatccc
gtcatcgagtgccatggccatggacgctgcaattactacgatgcgctagcctccttctgg
ctggccgttatcgagcagcaggatcagtttgtgcagccgcgccagcaaacgctcaaggcc
gaccaaaccagcaagattagcagatgcactgtgtgtcgtcgtcgtggcgacagcttcttc
acagtcaaacggacttcctcaacatacagctccggctccggttccggctcgggctcgggc
tcgagctcttggtcatcgtcgtcttcggcaggagccagagcgccagcgccttccccctac
tccagctggtcgggtggctatccgagcatcgatttccgtacggcaccgcaaacagtacgc
cagccgcagccgcagccaccgccggccaactacaaccgtcagcccaactatcggaacccc
tatcaatacgccggcacgcgccaatatcgtcggcgtccgcgcgacgacacctacgctcct
tag
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