KEGG   Drosophila virilis: 6628761
Entry
6628761           CDS       T01066                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
dvi  Drosophila virilis
Pathway
dvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6628761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dvi03041]
    6628761
Spliceosome [BR:dvi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    6628761
 Complex C
   U5 SnRNP specific factors
    6628761
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP eIF2A WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_LRRK2 Vps8_C_schizo
Other DBs
NCBI-GeneID: 6628761
NCBI-ProteinID: XP_002051901
UniProt: B4LU69
LinkDB
Position
4:14167288..14168800
AA seq 347 aa
MGTKRPNNSVVLAQEPKRSKNDIMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFT
TEFHPEGEMLLSSGFDRQLYIWQVYGDCENIMAMSGHSGAVMEAHFTPDGSHIFTCSTDK
TLAIWDIVTGQRVRRLKGHSNFVNSVQGSRRGQQLLCSGSDDRTIRIWDARKKQAAHVLE
SPYQLTAVCFGDTSEQVISGGIDNELKIWDIRKQQVLHHLRGHTDTITAVALSPEGDFVL
TNAMDNTLRVWDVRAYAPGERCVKVFQGHQHNFEKNLLRCAWAPGGDKISAGSADRHVYV
WDVNTRRILYKLPGHNGSVNDVDFSPREPLILSGSSDKTLYLGEIED
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggcacaaaacgtccaaataatagcgtggtgctggcgcaggagcccaaacgcagcaaa
aatgacattatggcctatacaaatcgggacaaggcactgctcgaatcgggcgtgcggcgc
acctccaatctgcaagcgcccatcatgcagctggagggacatgagggcgaaatatttacc
acagaattccatccggagggcgagatgctgctctcctcgggcttcgataggcagctgtat
atctggcaggtgtatggggattgtgagaacattatggccatgtccgggcacagcggagcc
gtcatggaggcgcattttacgccggatggctcccatatattcacctgctccacagacaaa
acgctggccatttgggacattgtgacgggtcagcgagtgcggcgtctcaaagggcattcg
aactttgtgaacagcgtgcagggctctagacgtggccagcagctgttgtgctccggcagc
gatgatcgcaccatacgcatctgggatgcacgcaaaaagcaggcggcccacgtgctggaa
tcgccctatcagctgacggccgtttgctttggcgataccagcgaacaggtcatcagcggc
ggcattgacaacgagctcaagatctgggacatacgcaaacagcaggtgctacatcatttg
cgtgggcacacggacaccataacggccgttgcactgtcgccggagggcgactttgtgctc
acgaatgccatggacaatacgctgcgcgtgtgggatgtgcgcgcctatgcgccgggcgag
cgttgcgtcaaggtgttccaggggcatcagcataactttgagaagaatctgttgcgctgc
gcctgggcaccgggcggcgacaagatcagcgccggttcagccgatcgtcatgtctacgtt
tgggacgtgaacacccggcgaatactgtacaagctgcccggacacaatggcagcgtaaac
gatgtggatttcagtccgcgcgaacccttgatactgtccgggtccagcgacaagacactg
tatctgggcgaaatagaggactag

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