Drosophila virilis: 6629839
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Entry
6629839 CDS
T01066
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dvi
Drosophila virilis
Pathway
dvi03013
Nucleocytoplasmic transport
dvi03015
mRNA surveillance pathway
dvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6629839
09122 Translation
03013 Nucleocytoplasmic transport
6629839
03015 mRNA surveillance pathway
6629839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6629839
03041 Spliceosome [BR:
dvi03041
]
6629839
03009 Ribosome biogenesis [BR:
dvi03009
]
6629839
03012 Translation factors [BR:
dvi03012
]
6629839
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6629839
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
6629839
mRNA cycle factors
Stress granule specific factors
6629839
Spliceosome [BR:
dvi03041
]
Complex C
Other components
EJC/TREX
6629839
Ribosome biogenesis [BR:
dvi03009
]
Eukaryotic type
90S particles
Helicases
6629839
Translation factors [BR:
dvi03012
]
Eukaryotic type
Initiation factors
eIF-4
6629839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
6629839
NCBI-ProteinID:
XP_002054539
UniProt:
B4LYN9
LinkDB
All DBs
Position
2:complement(7344106..7345712)
Genome browser
AA seq
399 aa
AA seq
DB search
MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIKPI
VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDM
MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaatgcacaggccgaggatctctcgaacgtggagtttgagactagcgaa
gacgttgaggtgatacccaccttcaatgccatgaacctgaaggaggagctgctacgcggc
atttacgcgtacggctttgaaaaaccttcggccatacaacagcgcagcatcaagccaatt
gtaaaggggcgggacgtcatagcacaagcgcagtccggtacgggcaagactgccacattt
tccatttccatactacagagcctggacacaacgctgcgtgagacacaggtgctgtgtctg
tcacccacacgcgagttggctgttcaaatccaaaaggtcattcttgctctgggcgatatg
atgaacgtacagtgtcatgtgtgcattggcggtacaaatctgggcgaggacatacgcaag
ctggattacggtcagcatattgtgagtggaacaccgggtcgtgtcttcgatatgatcaag
cggcgtgttctgcgcacaagagcgatcaaaatgctggtgctcgacgaagcggatgagatg
ttgaacaaaggtttcaaggaacaaatctatgatgtttaccggtatttgccgccagctacg
caggttgtgctcatttctgcaaccctgccgcacgagattctagaaatgacatctaaattc
atgacggatcctattcgaattttggtcaaacgtgatgaattgacgctggaaggcattaaa
caattttttgttgccgtggagcgcgaggaatggaaattcgatacgttatgcgatctctat
gacacactgaccatcacacaggcggtcattttctgtaacaccaagcgcaaggtggactgg
ctgactgagaaaatgcgcgaagccaatttcacggtcagctccatgcacggcgatatgccg
caaaaggagcgtgacgaaatcatgaaagagttccgagctggacagtcacgtgtgctcatt
accaccgatgtgtgggcgcgtggtatagacgtgcagcaggtgtccttggtcatcaactac
gacctacccaacaatcgtgagctgtacattcatcgcatcggtcgctcgggtcggtttgga
cgcaagggtgtggccattaattttgtaaagtccgatgatatacgcattttgcgtgatatt
gagcaatattattcaacgcaaatcgacgagatgccgatgaatgtggcagatttaatataa
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integrated database retrieval system
