Drosophila virilis: 6629925
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Entry
6629925 CDS
T01066
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
dvi
Drosophila virilis
Pathway
dvi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
6629925 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6629925 (DNAlig3)
Enzymes [BR:
dvi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
6629925 (DNAlig3)
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
6629925 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Sda
Motif
Other DBs
NCBI-GeneID:
6629925
NCBI-ProteinID:
XP_002054326
UniProt:
B4LXG8
LinkDB
All DBs
Position
2:complement(9610466..9613389)
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AA seq
818 aa
AA seq
DB search
MIKLLRNCRVSHFTRIRSRGMSSKQARNEDNKLDTFRRICDEIAGEASYLRKVEKLEHFL
KKGSSGSGFKGDLLQWVQFLIPGATQRVYNLQNKALLKLFARIFHVDQQQMHLDLEQDGD
ISETLRKHFASSSKLKPQAQSKLYLHEVENMLCQLEQRTKEDEQTEVLQEVCKQATDLDL
RTFIRLIKQDLRINARARHILDAFGPEAYPAYQSTRDLKLIVENFAGTQGKPKSLKGLPK
AATKSSKKAIGAIQVMTPISPMLANACKSVEEAFKKNPGGLYSEVKYDGERVQIHKHGSE
FKFFSRNLKPVVDHKIKELKDYIPRAFPGANDMILDSEIILVNTKTGELLPFGTLGAHKK
HTYANASVCLFVFDCLLYDGDDLTQLSFCKRREILEQNIKPIKHHVQLSESQFLKTKNEL
AMMTAKVLQANLEGVVLKSPEGTYQPGKRNWLKVKKDYLFGGKMADTADLVVLGAWYGSG
KKGGVLSIFLMGCYDARDRLWKTVTKVHSGLDDASNDEVHESLMKLTERADASKIPNWLL
CKKALIPDVLAKIPEQMPVWEITGAEFTQSEAHTAAGISIRFPRITRLRSDKSAMQANDL
EHLEQLYAASKQNVNVDLLLANCEADRDDALKNKLKLEKTPQKSKAPKEATASSSKKPKR
SKSASDDEEVTPSKGRSSRKMHKLEAPTVTSQGNLKDFFKPKIVIADVKIENPPLASTSS
NYGKGEDRKLFIGLEAHFVADAAQPKLMDEFVRHGGILAKCTQRASLVFHDCNKNKDLSQ
LRPLYRRSCRHLNIKWLEETLKMKTLQPYPLYALLLQS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgataaaattgttaaggaattgtcgtgtttcgcattttactcgcattaggagcagaggt
atgagcagcaagcaggcgcggaatgaggacaacaagctggacacatttcgacgtatttgt
gatgaaatagccggcgaggcgagctacttgcgaaaggttgagaaactggaacatttcctt
aagaagggcagcagcggctcaggtttcaagggtgacctgttgcagtgggtgcagttcctc
atacccggcgccacgcaacgtgtctacaatttgcagaacaaggcattgctcaagttgttt
gcacgcatcttccatgtcgaccagcagcaaatgcatctggacttggagcaggatggtgac
atttcggaaaccctgcgcaaacactttgccagctccagtaaactcaagccgcaggcacag
agcaaactttacctacacgaagtagaaaatatgctttgtcagctggaacagcgcacaaaa
gaggatgagcaaacggaggtactgcaagaggtgtgcaaacaggccacagacttggatttg
cgcacgtttatcaggctaattaaacaggacctgcgcattaatgcacgtgctaggcatata
ctggatgcctttggaccagaggcctatccagcgtatcagagcactcgcgatctgaaattg
attgtagaaaatttcgcaggaacccagggcaagccaaaatcactcaaaggtctcccaaag
gcggccacaaaaagctcgaagaaggcaatcggcgcaattcaagtaatgacgcctatttcg
cccatgctggcaaatgcctgcaagtctgtggaggaggcatttaaaaagaatcctggcggc
ctgtacagcgaagtaaaatatgatggggaaagagtgcaaatacacaagcacggctctgag
tttaagtttttcagcaggaatctaaagccggtggtagaccacaaaatcaaggagctaaaa
gattatataccgcgcgcctttcccggcgccaacgacatgatacttgattcggaaatcata
ctggtgaacactaaaaccggcgagttgcttcccttcggcacactgggcgcccacaagaaa
catacctatgccaatgcgtcagtctgcctttttgtctttgattgcttgctttatgatggc
gatgatctaactcagctctcattttgcaaacgccgagagattctggagcaaaacattaag
cccatcaaacatcacgtacagttgtccgagtcgcagtttttgaaaaccaaaaatgagttg
gcaatgatgactgccaaggtgcttcaggctaatttggagggtgttgtgctaaagagtccc
gaaggaacgtatcagccgggtaaacgtaactggcttaaagtgaaaaaggattatctcttt
ggtggcaaaatggctgatacggcagatctggtcgtgctgggcgcttggtatggctctggc
aagaaaggcggcgtgctcagcatttttctcatgggttgttacgatgcacgcgatcgtctc
tggaagacggtcactaaagtgcactctggcctggatgatgcctcaaacgatgaggtacac
gagtcactgatgaaactaacagaacgcgccgatgccagcaaaattcctaactggctgctc
tgtaaaaaagcgctgatacccgatgtgctggccaagattccagagcaaatgcctgtgtgg
gaaatcacgggcgcagagtttacacagtctgaagcgcacactgctgcgggcatctccata
cgttttccgcgcatcacgcgcttacgcagcgataaatccgcaatgcaggcaaatgatctg
gaacatttggagcagctctatgcagcctccaaacaaaatgtcaatgtagatctgctgctg
gccaactgtgaggcagacagggatgatgcccttaaaaacaagcttaaactggagaagacg
ccccaaaaaagcaaagcacccaaagaggccacagcgagcagcagcaaaaagcctaagaga
tccaagagcgcctctgacgatgaggaggtaacaccatcaaaaggccgcagctcacgaaaa
atgcataagctggaggcacccacggttacgtctcaaggtaatcttaaagatttttttaag
cccaaaatagtcatagcggatgtaaagattgaaaacccgccactggccagcacatcgtcc
aactacggcaaaggcgaggatagaaaattatttatcggcctggaagcgcattttgtagcg
gatgcagcccagcctaagctcatggatgaatttgtgcgtcatggtggcatcttggccaaa
tgcacgcaaagggctagcctggtatttcatgactgtaataagaacaaggatttgtcgcag
ctcagacctctttaccgtcgcagctgtcgtcatctcaacatcaaatggctagaggaaacg
ctaaagatgaagacattacagccttatccgctctatgcgttgcttttacagtcttag
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