Drosophila virilis: 6629937
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Entry
6629937 CDS
T01066
Symbol
Ndc1
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
dvi
Drosophila virilis
Pathway
dvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
6629937 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6629937 (Ndc1)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
6629937 (Ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
6629937
NCBI-ProteinID:
XP_002054365
UniProt:
B4LXS6
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Position
2
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AA seq
580 aa
AA seq
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MSNATITTCKLLLFGRCVRAVLLSVGVQFLLLTVFLLLVNFQLLHPLDWVMGSLRLVCSF
YTWFACIPLLGAVVFYGMTLSHQHLAERRYCPTRYRWLLQNGPRKLLFLFAHLVVGYLTA
WLYTGYLHTDYRHFVHKCYGQDCLNSYHIFLLGMGLSAGCYYFATEYMHEEASIDFDFAE
QSRPEKLRELLYGTLLKAPISSVMPTLCYTFIFWLFGAFLKYRLSVLVNVDTDDRLLGIL
DVITNGRLLFYGWLLSAQIVSNMHLMRCFYATLLSEKLPMVVARNRVSLGSEQEVTVVAG
LGVLNVYVVQCLAANFLYEEARRKNSSVRAEIFQLTEPGNRPANWRALCDQCVSIVGSFT
EELSDSMRQISLMKGNEQNFASIHSDSSAALLAEKLLLRQYNQMHGIRPVVSLPRDVPNQ
EWDTKAMDSIRHVPNWCERTSMKLEKLLQQLLRRIPGIVYFFSEPEGAKTEFLLENALPV
IWLTQALAHICVASINEDSYGVVQDDLPGIIKALHRLKCELDRLSNGMPNFRTTSNSFNH
LRYAVRRSLYNICTSFYKYLGELSSSGEELRQLQAFVYQG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgcgacaataacgacatgcaagctactattatttggccggtgtgtgcgcgcc
gtattgctcagcgtgggcgtgcaatttctgctgcttaccgtatttttgctgctcgttaac
tttcaattgctgcatccactggattgggtaatgggctctttgcgtctggtgtgcagcttc
tacacgtggtttgcctgcatacccctgcttggcgccgttgtgttctacggaatgacgctg
tcccatcagcatctcgccgagcgtcgctactgccccacacgctatcggtggctgctgcaa
aatggtcctcgcaaactattatttctattcgctcatttggtcgtaggttacctaactgcc
tggttgtacacgggctatttgcacacggactatcggcattttgtgcataaatgctatggc
caggattgtctgaactcctatcacatctttttgctgggcatgggcctctccgccggctgc
tactactttgccaccgagtacatgcatgaagaagcatccattgattttgactttgctgaa
cagtcgcggccagaaaagctgcgggagctgctctatggcaccctgctgaaggcgccaatt
agttccgtgatgcccacgctgtgctacacgtttatcttttggctatttggtgcctttcta
aagtacaggctgagtgtgctagtcaacgtagacacggacgatcggctgctgggcatttta
gatgtgattaccaatggacgattgttattctatggctggctgcttagcgctcagatagtg
agcaacatgcatctcatgcgatgcttttatgccacgctgctttccgagaaattgccaatg
gttgttgcacgcaatcgagtttcccttggcagcgagcaggaggtcaccgttgtggctggt
ctgggcgtcttgaatgtgtatgtggtgcagtgcctggccgccaattttctgtacgaagaa
gcacgacgcaaaaactcatcggtgcgtgcggaaatctttcagctaaccgagccaggcaat
cggccagccaactggcgcgccctttgcgaccaatgtgtcagcatcgtgggcagttttacc
gaagagcttagcgattcaatgcggcagatcagcttgatgaaaggcaatgagcaaaatttt
gcgtctattcacagcgacagtagtgccgctctgctggccgaaaagctgctgcttcgacag
tacaatcaaatgcatggtattcgtcctgttgtttcgctaccacgtgatgttcctaaccag
gaatgggatacaaaagccatggatagcatacgccatgtgccaaattggtgtgagcgtaca
tcgatgaagctggagaagttgctgcaacagctgctgcgtcgtattcctggcatagtttat
ttcttctccgagccggaaggcgccaagacggaatttctactggaaaatgcgctgcccgtt
atctggctaacacaggcgttggcgcatatctgcgtcgcctcaatcaatgaggatagttat
ggtgtggtgcaggacgacttgccgggcatcattaaggcattgcatcgtctcaaatgcgaa
ttggacaggctgagcaacggcatgcccaactttcgcacaaccagcaatagcttcaatcac
ttgcgttacgcagtgcgccgcagtctctacaacatttgcacatcgttttacaaatattta
ggtgaactatcatccagtggcgaggagctgcgtcagctccaggcattcgtttatcaggga
tag
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