Drosophila virilis: 6630008
Help
Entry
6630008 CDS
T01066
Symbol
Polr2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dvi
Drosophila virilis
Pathway
dvi03020
RNA polymerase
dvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6630008 (Polr2B)
09124 Replication and repair
03420 Nucleotide excision repair
6630008 (Polr2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6630008 (Polr2B)
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6630008 (Polr2B)
Enzymes [BR:
dvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6630008 (Polr2B)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6630008 (Polr2B)
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6630008 (Polr2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
6630008
NCBI-ProteinID:
XP_002054770
UniProt:
B4M040
LinkDB
All DBs
Position
2:complement(5283055..5287070)
Genome browser
AA seq
1176 aa
AA seq
DB search
MMYENEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGMDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgagaatgaagaagagaatttcgatgaggaaaatgcagaggaaatctcgcac
gagttgtggcaggaggcctgctggattgtgatcaacgcctatttcgacgaaaagggcctg
gtgcgccagcagctggacagctttgacgagttcatacaaatgtctgtgcagcgcattgtg
gaggactcgccggcgattgagctgcaggcggaggcgcagcatacgtccggcgaggtagag
acaccgccccggttttcgcttaaattcgaacagatttacttgtccaagccgacgcattgg
gagaaggatggctcgcccagtcccatgatgcccaacgaggcgcgcttgcgcaatctgacc
tactcagctccgctctatgtggatataacaaagacaaaaaatgtggagggcatggatccc
gtcgagacgcagcatcagaaaacctttattggcaaaattcccatcatgttgagatcaact
tattgcctgctatcccaacttacggatcgtgatttgaccgagttaaatgagtgcccactg
gatccaggtggctattttattataaacggctcggaaaaagtgctcattgcgcaagagaag
atggccacaaacaccgtgtacgtcttcagcatgaaggacggcaaatatgcctttaaaacg
gagatacgctcctgcttggagcatagttcgcgacccacctcaacactctgggtgaacatg
atggcgcgtggctcgcagaacatcaagaagtcggcaattggacagcgcatcattgccatt
ctgccgtatattaagcaggagatacccattatgattgtgtttcgggcattgggctttgtg
gcagatcgcgatatattggagcacataatttacgattttgacgatccagagatgatggaa
atggtgaagccctcactggacgaagccttcgtcgtgcaggagcaaaatgtcgctttgaat
ttcatcggagctcgtggagcacgcccaggagttaccaaggacaagcgcataaaatacgct
aaggaaattctgcaaaaagaaatgctgccgcatgtgggagtctcagacttttgcgagaca
aagaaggcctatttcctaggctacatggtgcatcgcctgctgctggcttcgctgggccgc
cgtgaactcgacgatcgtgatcactatggcaacaaacgtttggatctggctgggccgctt
ttagccttcctcttccgcggcctcttcaagaacttaatgaaggaggtgcgcatgtacaca
cagaaattcattgatcgcggaaaggacttcaatctggagctggctatcaagaccaacatt
attacagatggtctgcgttattcgctggccaccggcaactggggtgatcagaagaaggct
catcaggctcgtgccggtgtctcgcaggtgttgaatcgtctcacatttgcctccacattg
tcacatttgcgccgtgtcaactcgcccatcggacgcgacggtaaattggccaagccgcgt
cagttgcacaacaccctgtggggtatgttgtgcccggcggagacacctgagggcgcagct
gtgggtttggtcaagaatttggcactcatggcctacatttcggtgggttcacagccgtcg
ccgattctggaattcttggaagagtggtcaatggaaaatctagaggaaattgcaccctcg
gcgattgcggatgcgaccaaaatcttcgtcaatggctgctgggtgggcattcatcgagat
ccggagcagctgatggccacgctgcgtaaattgcgccgccagatggatatcattgtatcc
gaggtgtccatgattcgcgacattcgcgatcgtgagatcagaatctacacggacgctggc
cgcatatgtcggcctctgcttattgtggaaaatggcacgctgctattaaagaaaacgcac
gtggagatgttgaaggagcgagactacaacaactacagctggcaggtgctggttgcctct
ggtgtcgttgagtacattgacacgctcgaggaggagacggtcatgattgccatgtcgccc
tacgatctcaaacaggacaaggactacgcatattgtaccacctatacgcactgtgagatt
catccggccatgatactgggcgtttgtgcctccattatacccttccccgatcacaaccag
agtccacgtaacacctatcaaagtgctatgggcaagcaggccatgggcgtctatataacc
aacttccatgtgcgcatggacacattggcgcacgtgctctattatcccatgaagccgttg
gtgacaacacgctccatggagtacttgcgtttccgtgagctgcctgcgggtattaactca
attgtggcaattttgtgctacactggctataaccaggaggattctgtcattctgaacgcc
tcggcagtcgagcgtggattcttccgttcggtgttctatcgttcgtacaaggatgccgag
aataagcgtgttggtgatcaggaagagaactttgagaaaccgcatcgtggcacatgccag
ggcatgcgtaacgctcactatgacaaactggacgacgatggcatcattgcacctggcata
cgtgtctctggagatgatgtcgtcattggcaagacaataacgctgcccgaaaacgatgat
gagctggacagcaatacaaagcgattcgctaagcgtgatgcctccacgtttttgcgtaac
tcggagacgggcattgtggatcaggttatgttgacactgaacagcgagggctataagttc
tgcaagattcgcgtgcgttcagtgcgcataccacagattggcgacaagtttgcctcgcgt
cacggacagaagggtacatgtggcatacagtatcggcaagaggacatgccattcacctgt
gagggtttggcgccagacattatcatcaatccgcacgctattccctcgcgtatgacaatt
ggtcatttgatcgaatgcctgcagggcaagctgggctccaataagggcgaaattggtgat
gccacgcccttcaacgatgccgtaaatgtgcaaaagatatcaactttcctgcaggagtat
ggctatcatttgcgtggtaatgaggtcatgtacaacggccacacgggacgcaaaatcaat
gcgcaggtgttccttggtcccacctactatcaacgtctcaagcacatggtggacgacaaa
atccattcacgtgcccgtggtcctgtgcagattcttgtgcgacagcccatggagggcaga
gcccgtgacggcggtctgcgtttcggtgaaatggagcgcgattgtcaaatttctcacggc
gccgcacagttcttgcgcgagcgactgttcgaagtgtctgatccgtatcgagtgcatatt
tgcaacttctgcgggctgattgctattgccaatttgcgcaacaacactttcgagtgcaaa
ggttgcaagaacaagacgcaaatctcgcaggtgcgtctgccgtacgcggccaaactgctc
ttccaggagctcatgtccatgaacatcgcaccacgactgatggtcagctag
DBGET
integrated database retrieval system
