Drosophila virilis: 6630057
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Entry
6630057 CDS
T01066
Symbol
Dcr-1
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dvi03036
]
6630057 (Dcr-1)
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
6630057 (Dcr-1)
microRNA pathway
RISC loading complex
6630057 (Dcr-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
6630057
NCBI-ProteinID:
XP_002054279
UniProt:
B4LXC1
LinkDB
All DBs
Position
2:complement(10116434..10123902)
Genome browser
AA seq
2250 aa
AA seq
DB search
MAFHWCDNNLHTTVFTPRDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRPGRR
NGKVSVYLSSQIDAEATSMYTMLTHLTDLKVWQEQPDQHVPSNHCWTDYHVSIHKPSTFL
SLLQSGDLLLSSIQLIVLEDCHDSSVYRSILPIFEDFILPAKPSDRPRILGLAGPLHSAD
CELEELNAMLDTLEQQMLCRIETASDIVTVLRYCAKPHEYIVQCAPFEMDQLSRVIVDIL
TTHKSFLSDHRYDPFEIYGTDQFMEDLKDIPDPKLDPLNVLDGLLAVLHEMGPWCTQRAA
LHFYQRNEKLKVKTPHERHYLLFCLVNTALVEINALCEQTFQKQVMEDPLGTIERYSSPK
VRRLLRVLRCFKPAEAHTQTDGLRRMRHQVDQADFNNLSHALKTKCQVIEQLDEQLGSTR
SIVNNLLHLIQATDKEQAKTSTEGPAPVTPPPPTTKSKSNAQPHTRRRAHTRRHNRHQHD
TSETLCALIYCNQNHTARVLFELLAELSRRDPDLKFLRCQYTTDRVADPATEPKEAEQEH
RRQEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPA
YHIMLVAPSYDPTAAATDDTVQLNDQSHRYLCATISDSTEQELDSDSDDSALPNSLASDP
YTFGTARGTVKILNPEVFSNQPPTASDIKLQEIQDEVPTVLDGGNSSDDAMSLTNTTPSD
RSAERRHKQRFECELPAMPDNLLFKEVNVSVAADTLTSTTQALVHQMAQYREIEQMLLSK
CANTEPAEVEQQQAERFTSCLAAFQPRPELSTGASVDLSTAIALVNKYCARLPSDTFTKL
TALWRCARSVRQGVVLFQYTLRLPINSPLKHDIVGLPMPTQTLARRLAAFQACVELHKIG
ELDDQLQPIGKEGFRALEPDWECFELEPEDEHIVQQNDEPRPGTTKRRQYYYKRIASEFC
DCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKIYPPEEARQGFGILTLKRIPKLSAFSI
FTRSGEVKVSLELARERVVLTQEQISCINVFLNYTFTNVLRLQKFLMLFDPDSTENCVFI
VPTVKTEQDSRIIDWQFLELIQATGNLMPQPVPDGERQAQPFDAQRFQDAVVMPWYRNQD
QPQYFYVAEICPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTAQPLLDVDHTSARLNFL
TPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCILYR
INGLLLADDIRKQVSADLGLGRQQIDDEQFEWPMLDFGWSLSEVLKKSRESKQKPDTTDA
IKQAIDDPAQQTVDEPIIEKATKSANELVIEGEEQLSNTDDFIEIGTWSNDMADDIASYS
DGDEDEEDEDFLPVLPANVKFCDQQTRYGSPTFWDVSNSSGFNKSAAPGQKRTGKPHGGS
GIGNAAKEEGKPNYAYYDSDNSLSSSYDDDEHVGPIYQYSSEDDDSDDIVAGRIEFTSKN
EAETIETAQELEKRQKQLSIIQATNANERQYQQTKNLLIGFNFEQAQHRSSNIYEQSIVR
FKSEIESSGMLVPHGEELVLQRTEVSTTKADKDGCTLQLELLKEFLPYVPEVEMLAKLAS
KPSLQLSDLVELNATWLQQHKHEIYNVMGCGDSFDNYNDHNRLNLDNKQLRLEYQPELVK
KSECEPHRTEKQITGRPDGAFSFDHQPDLVGHPGPSPSIILQALTMSNANDGINLERLET
IGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPH
DNWLPPCYYVPKELEKALIEAKIPTQHWKLVDLLDIKNLSSVQICEMVREKAESLGLVGS
VEQPAAAQQLTHNANLDDSNETNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECG
PRGALLFMAWLGVRVLPYKLEPTAAAIEQRMPGSTKPDLNNMITVYGDWPTPRSPLLHFA
PNANAELEHLLSGFEEFESSLGYTFSDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVL
DYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGLNDVIDRF
VRIQQENGHIISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWQV
YSNMMKPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRG
IGRNYRIAKCTAAKCALRQLKKQGLIAKKD
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccactggtgcgacaacaacctgcataccacggtattcacgccacgcgacttt
caagtggagcttctggcgtccgcctttgaacgcaacaccatcatctgcttgggtcacaga
agctctaaggagtttatagcactaaagcttttgcaggagctctcccgaccaggacgccgg
aatggtaaggtgagcgtgtacttaagctctcagattgatgctgaggccacgtccatgtac
acgatgctcacacacctcactgatctcaaagtgtggcaggagcagccggatcagcatgtg
ccgtccaatcattgctggaccgactaccatgtcagcatacacaaaccaagcaccttcctg
tcgttgctgcaatctggggatctgcttctaagcagtattcaacttattgtgctggaggat
tgtcacgacagctctgtgtatcgcagtattttgcccatttttgaggactttattctgcct
gcaaagccatcggatagacctcgcatattgggcctggccggccctttgcatagcgccgat
tgcgaattggaagagcttaatgccatgctagatacattggaacagcaaatgttgtgtcgc
atcgagacagccagtgacattgtcacggtgctgaggtactgcgccaagccgcatgagtat
attgtgcagtgtgcgcccttcgagatggatcagctgtcgcgcgtgatcgtcgatattcta
actacacataaatcgttcttaagtgatcatcgttatgatccctttgagatctatggtacc
gatcagtttatggaggacctaaaagatatacccgatcccaagctggacccgctgaatgtg
ctggacggcctgcttgctgtgctccatgaaatgggaccctggtgtacgcaacgcgccgcc
ctacatttttaccaacgcaacgaaaagctaaaggtcaagactccacacgaacgccactat
ttgctcttttgcctggtgaacacagcgctagtagaaatcaatgcgctctgcgagcaaaca
ttccaaaagcaagttatggaagatccacttggcaccattgagcgctactcaagccccaag
gtgcgccgactgctgcgagtgctccgctgcttcaagccagctgaagcacacacccagacg
gatggcttgcgtaggatgcgccaccaagtggaccaagcggattttaataacctctcgcat
gcactgaaaaccaagtgtcaagtgattgagcagctagatgagcagcttgggagtacgcgt
tctatagttaataatttgctgcatctgatccaagcaacagataaggaacaagcgaaaacc
agcaccgaggggccagctccagtgactccaccaccgcccacaacaaaatccaaatccaac
gcacagccacacaccagaaggcgggcccacacacggcgtcacaatcggcaccagcacgat
acaagcgagaccctctgcgcacttatctattgcaatcaaaatcacacggcgcgcgtactg
ttcgagctgcttgcggagttgagcagacgcgacccggatctcaagtttctgcgctgccag
tacaccacggatcgcgtggccgatcctgcgacagagccaaaagaagctgaacaggagcac
aggcggcaagaagacgtgctcaaacgcttccgaatgcacgattgcaatgtgttaattggt
acctcggtgctggaggagggcattgatgtgcccaagtgcaatctggtggtgcgctgggat
ccacccaccacctaccgcagttatgtgcaatgcaagggacgagcgcgagccgcacccgct
taccacataatgcttgtggcaccgagctatgatccgactgcagcggcaactgatgataca
gtgcagctgaacgatcaaagtcatcgatatttatgtgccacgattagtgattctactgag
caggagctggacagtgactcggacgactcggcattgcccaattccctggcctcagatcca
tatactttcggtacagctcgtggaacggtaaaaatacttaacccggaggtgtttagcaat
caaccgccgaccgcttctgacataaagctgcaggagattcaggatgaggtgccgacagtg
ttagatggcggtaactccagtgatgacgccatgagcttgaccaacaccacgcccagtgac
aggtccgcagagcgcagacacaagcagcgcttcgaatgcgaactccccgcaatgcccgat
aatctcctatttaaggaggtcaacgtctccgtcgcggcggacactctgacgagcactact
caggcgctagtgcatcaaatggcacaatatcgtgaaattgaacagatgctgttatcgaaa
tgcgctaatacggagccagccgaagtggagcaacaacaagcagagcgcttcaccagctgc
ctggccgcctttcagcccaggccggagctgtcgacaggcgcttctgtagatttgagtact
gccatcgcgctggtcaacaagtattgcgcccgcctgcccagcgatacctttaccaagcta
actgctctgtggcgctgtgcgcgttccgtacgacaaggtgttgtcctcttccagtatacg
ttacgcctgcctatcaattcaccactgaagcacgacattgttggtcttccaatgcccacg
caaacactggcacgtcgtctggccgcattccaggcctgtgtggagctgcataagatcggg
gaactggatgatcagctgcagcccattggcaaggagggctttcgcgctctggaaccggac
tgggagtgcttcgaactggagccggaggatgagcatatagtgcaacaaaacgatgaacca
cgtccaggcaccaccaaacggcgccaatactattataagcgcattgcatcggaattctgt
gattgtcgaccagtggctggagctccctgctatctgtactttattcagttaacactgcaa
tgtcccatacccgaggagcaaaacacacgtggtcgtaagatttatcccccggaggaggcg
cgtcaaggctttggcatattaacactgaaacgcatacctaaactgagtgctttctccata
ttcacacgatctggcgaagtaaaggtatcgctggagcttgcacgtgagcgtgttgtgcta
actcaagagcagattagctgcatcaatgtcttccttaattatacgttcacaaatgtgcta
cgcctgcaaaagttcctcatgctcttcgatccggattccacagaaaattgtgtgttcatt
gtgccaacggtaaaaacggagcaggacagccggattatagattggcaatttctggagctc
atacaagccactggaaacctgatgccgcagccagtgccagatggagaacgacaggcgcag
ccctttgatgcgcaacgtttccaagatgctgtcgtcatgccctggtaccgaaaccaagat
caaccgcagtacttttatgttgccgagatctgtcctcatctatcgccgctcagctgcttt
ccgggcgacaattatcgcaccttcaagcattattatctggtaaaatatggcctcaccata
cagaatacggcacagccgctgctcgacgtggatcatacgagtgcacgtttgaattttcta
acgccacgttacgtaaatcgtaagggcgtggcactgccaaccagttcggaggaaacgaag
cgtgccaagcgggaaaatcttgaacagaagcagattctagtgcctgaactgtgcacagta
catccgtttccggcatccctatggcgcacggcagtttgcctaccctgtattctataccgc
atcaacgggctgttgctggcagatgacattcggaagcaggtctctgccgatcttggcctg
gggcgacaacagattgacgatgagcaatttgagtggcccatgctagactttggttggagc
ctgtcggaggtattgaaaaagtcacgcgaatctaagcagaagccggacaccacggatgca
atcaaacaagccatagatgatcctgcgcaacagacggtggatgagccgatcattgagaag
gccaccaagagcgctaatgagctagttattgaaggcgaagaacaattgagtaatacggat
gacttcattgagattggcacctggtccaatgacatggccgatgacattgccagttactca
gatggcgatgaggacgaggaggatgaggactttctgcctgtgctacccgccaatgtgaag
ttctgcgaccagcagacgcgatacggctcgcctactttctgggatgtaagcaacagcagc
ggatttaataagtcagcagcgcctggacaaaagcgcacaggaaagccgcatggtggctct
ggaattggcaatgctgcaaaagaagagggaaaacccaactacgcctactacgactcggat
aactcacttagctctagctatgatgatgacgagcatgtgggaccaatttatcaatatagc
tcggaagatgatgatagtgacgacatcgttgccggtcgcattgagttcacctcaaagaac
gaggcggagaccatcgaaacagcgcaggagctggaaaagcgccagaagcagctgtccatt
atacaagccaccaatgccaacgaacgccagtaccagcagacaaagaatcttctcattggc
ttcaatttcgagcaggcacagcacagaagcagtaacatctacgaacagtctattgtgcgt
ttcaaatcagagattgagagcagcggcatgttagttccacacggcgaagagctggtgcta
cagcgcactgaagttagcacaacgaaagctgacaaggatgggtgtactttgcagctggag
ctgctaaaagagtttttgccatacgtgccggaggtggaaatgctggccaagctcgccagc
aaaccatctctacagctctcggacttggttgagctaaacgctacgtggctgcagcagcac
aagcatgaaatttacaacgtaatgggctgtggcgatagctttgataactacaacgatcac
aaccgactgaacttagacaataaacagctcagactggagtatcagccagagttggtaaaa
aaatcagagtgcgagccacatcgaactgaaaagcaaataacgggcaggcctgatggggcc
ttcagctttgatcatcagccggacctggtgggacatcccggaccaagccctagcatcata
ttgcaggctctcacaatgtccaatgccaacgatggcatcaatctggagcgcctggagaca
ataggtgattcgttccttaaatatgccattaccacatacctgtacatcacctatgagaat
gtgcacgagggcaagctaagtcatctgcgctccaaacaggtggccaatctgaatctgtat
cggctgggacgacgcaagcgactgggcgagtatatgattgccacaaaatttgagccgcat
gacaattggctaccgccctgctactatgtgcccaaggagttggagaaggcgttgattgag
gctaaaatacccacgcagcattggaaactggtcgatctgctagatatcaagaatttaagc
agcgtgcaaatctgcgagatggtgcgtgaaaaggctgagtcgttgggtctggtcggcagc
gtggaacaacccgcagctgcgcaacagctgacacataacgcaaacctagatgactccaac
gagacgaacgatttcagttgcttcattccatacaatctggtctcgcagcacagcatacca
gacaaatccatagccgattgtgtggaggcgcttattggcgcctatctaatcgagtgtggg
ccgcgcggagcgctgctcttcatggcttggctgggagtccgtgtgctgccctacaaactg
gagccgacagcagcagccattgagcaacgtatgccaggcagtaccaagccggatttgaac
aacatgataacagtatatggtgattggccaacgccgcgcagtccgcttctgcattttgca
cccaatgctaatgccgagctagagcacttgctaagtggatttgaggagttcgagtccagc
ctaggctatacatttagcgatcgttcctatttactgcaggccatgacgcatgccagttac
acgcccaaccgcctgactgattgctatcagcgtctcgaatttctgggcgatgccgtattg
gactatttgataacgcggcatctgtatgaagatccacgccaacactcgccaggtgcttta
accgatctacgctcggcgctagtgaacaatacgatattcgcgtcattggctgtgcggcat
ggcttccataagtattttcgccatctgtccccagggctgaacgatgtcatcgatcgcttt
gtgcgcattcagcaggaaaatggacatatcataagtgaagagtactatttgctttctgag
gaggagtgcgatgatgctgaggatgttgaggtacccaaggctttgggtgatgtattcgaa
tcaattgccggtgccatttttctcgactcgaatatgtcactggatgtggtgtggcaggtc
tatagcaatatgatgaagcccgagatcgagcaatttagtaattctgtgccaaaatcaccc
atacgagagctgctcgagctggaaccggagacggccaagtttggtaagcccgagaagttg
gccgatggtcgtcgtgtacgcgtcactgtcgatgtcttctgcaagggcacattccgtggc
attggacgcaactaccgaatagccaaatgtacagctgccaaatgtgcactacggcagctg
aagaagcagggcctgatagccaaaaaagactaa
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integrated database retrieval system
