Drosophila virilis: 6630208
Help
Entry
6630208 CDS
T01066
Symbol
Caf1-55
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
dvi
Drosophila virilis
Pathway
dvi03082
ATP-dependent chromatin remodeling
dvi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6630208 (Caf1-55)
03083 Polycomb repressive complex
6630208 (Caf1-55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dvi03036
]
6630208 (Caf1-55)
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
6630208 (Caf1-55)
Histone modification proteins
HAT complexes
HATB complex
6630208 (Caf1-55)
HDAC complexes
Sin3A-HDAC complex
6630208 (Caf1-55)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
6630208 (Caf1-55)
PRC2.2
6630208 (Caf1-55)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
6630208 (Caf1-55)
Heterochromatin formation proteins
Other heterochromatin formation proteins
6630208 (Caf1-55)
Chromatin remodeling factors
NuRD complex
6630208 (Caf1-55)
NuRF complex
6630208 (Caf1-55)
NuRF complex (fruit fly)
6630208 (Caf1-55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_NOL10_N
ASA1
PAC11
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR41
MIOS_WD40
NBCH_WD40
Beta-prop_VPS8
Beta-prop_DCAF4
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
6630208
NCBI-ProteinID:
XP_002053711
UniProt:
B4M003
LinkDB
All DBs
Position
2:15531115..15533185
Genome browser
AA seq
429 aa
AA seq
DB search
MVDRSDNAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQD
GKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEI
EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ
KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHL
LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIP
ASDLETNTA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcgcagcgataatgcggaatcttttgacgatgccgtcgaggaacgtgtgatt
aacgaagagtacaagatatggaaaaaaaacactccatttctatacgatctggtcatgacg
cacgctctggaatggccttcactgacggcgcaatggctgcctgatgtaaccaaacaggat
ggcaaagattactccgttcatcgcctgatattgggcacacatacctcggatgaacagaat
catttgctgattgccagcgtccaattgcctagtgaggatgcccagttcgatggctcccac
tacgataatgagaagggcgaattcggtgggtttggctcagtttgtggtaaaatcgagatt
gaaatcaagatcaatcacgaaggggaagtcaaccgtgcacgctacatgccgcaaaatgct
tgcgttattgctaccaaaactccctcaagcgatgttctcgtatttgactatacaaagcat
cccagcaaaccggaaccatccggcgaatgccagccggacttgcgtttgcgaggacatcag
aaggaaggctacggtctgtcgtggaatcccaatttgaatggttacttgctctcggcctcg
gacgatcacaccatctgcttgtgggatatcaatgccacacccaaggagcatcgcgttatc
gatgcgaagaatatattcactggccataccgccgtcgttgaggatgtggcttggcatttg
cttcatgaatcactgttcggttcggtggccgatgatcagaagctgatgatttgggatacg
cgcaacaacaacacatcaaaaccatcgcacaccgttgatgcgcacacggccgaagtgaac
tgtttgagctttaatccttactcagaatttatattggccacgggatctgcggataaaacg
gtcgccttgtgggatttgcgcaatctcaagttgaaactacattcctttgagtcgcacaag
gatgaaatctttcaggtgcaatggtcgccccataatgagaccattctggcttcctcgggc
accgatcggcgtctacatgtgtgggatttatcaaaaattggcgaggagcagagctctgaa
gatgccgaagatggtccacccgagctgcttttcatacacggtggccatacggctaaaatc
agcgacttctcctggaacccaaatgagccatggatcatatgctctgtatcggaggacaat
atcatgcaagtatggcaaatggccgagaacgtgtacaacgatgaggaacccgaaataccc
gcctccgatctggaaactaacactgcttaa
DBGET
integrated database retrieval system
