Drosophila virilis: 6630223
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Entry
6630223 CDS
T01066
Symbol
Cpsf100
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dvi
Drosophila virilis
Pathway
dvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6630223 (Cpsf100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6630223 (Cpsf100)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6630223 (Cpsf100)
U7-dependent histone pre-mRNA processing factors
6630223 (Cpsf100)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PglZ_C
Motif
Other DBs
NCBI-GeneID:
6630223
NCBI-ProteinID:
XP_032295016
LinkDB
All DBs
Position
2
Genome browser
AA seq
754 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMYDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLSAGHMIGGTIWKIVKVGEEDIIYAIDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHIHLCHTLADIYKLPAGPKVVLASTPDMESGFTRDLFVQWASNPNNSIIFTTRT
GPGSLSMELVENSTPGRQIELDVRRRVELEGAELEEYLRTQGEKLNPLIVKPEVEEESSS
ESEDDIEMSVITGKHDIVVRAEGRHHSGFFKSNKRHHVMFPYHEEKIKYDDYGEVINLDD
YRIVDAGYDYAPMDEQNKENVKKEEPHVEQQTNGNLDNDVQMLEKPTKLISQRKTIEVNA
QIQRIDFEGRSDGESMLKILSQLRPRRVIVVHGTAEGTQVVAKHCEQNVGARVFAPQKGE
IIDVTTEIHIYQVRLTEGLVSQLQFQKGKDAEVAWIDGRLGMRLQAIDAPNQSEVTVEQD
VAAQEGKTLTLETLEEDEIPVHNSVLINELKLSDFKQVLMRNNINSEFSGGVLWCSNGTL
ALRRVDAGKVAMEGCLSEDYYKIRELLYEQYAIV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaattattaaactgcacaccatatccggggccatggacgagtcgccgccgtgc
tacattttacaaatagacgatgtgcgaatattgcttgactgcggctgggacgagaaattc
gatccgaattttataaaggaattaaaaaggcaagtgcataccctggacgcagtgctgcta
tcccatccagatgcatatcatctcggcgcgcttccgtatctggtgggcaagttgggcctc
aactgtcccatctacgcgacgatacctgtcttcaaaatgggccagatgttcatgtacgat
ttgtatatgtcgcactttaacatgtacgatttcgatctgttttcattggatgatgtggac
acagcctttgaaaagatcacgcaattaaagtacaatcaaacggtgtccctgaaaggaaaa
ggctacggcatttccataacaccgctaagcgcaggtcacatgattggcggcaccatttgg
aagatcgtcaaagttggcgaggaggatattatatatgccattgatttcaaccacaagaag
gaacggcatctcagcggctgtgagttggacagactgcagaggccatctctgctgataacg
gacgcctacaatgcacaatatcaacaggcccgaaggcgtgcgcgcgatgaaaaactgatg
accaacattctgcaaacggtgcgaaacaatggcaatgtacttatcgctgtggatactgct
ggtcgcgtcctggagctggcgcacatgcttgaccagctgtggaagaacaaggaatctggt
ttgatggcctattccttggcgctgctcaacaacgtcagctacaatgtcatagagtttgcc
aaatcacaaatcgaatggatgagcgacaaactgaccaaggcctttgagggcgcgcgcaac
aatccctttcagttcaagcacatccatctctgccacacgctcgccgacatctacaagctg
cccgcaggtcccaaggtggtgcttgccagcacaccggatatggagagcggctttacccgc
gatctatttgtgcaatgggctagcaatccaaataatagcataattttcacaacacgcacc
ggtcctggttcgctgagcatggagctggtggaaaattcaacgccaggcagacagattgag
ctggatgtacgacgacgcgttgagctggagggcgcagagctcgaggaatatttgcgcact
cagggcgagaaacttaatccgctcattgttaagccagaagttgaggaggagagtagctct
gaatccgaggatgatattgaaatgagcgtgatcacgggcaagcatgatattgtggtgcgg
gccgagggccgtcatcattcaggcttcttcaagtcaaacaaacgccatcatgtcatgttt
ccctaccacgaagaaaagattaagtatgacgattatggtgaagtcatcaatctggatgac
tatcgcattgtggacgccggctacgactacgcgcccatggacgagcaaaacaaggagaat
gttaaaaaggaggagccacatgtggagcagcagaccaatggcaacctggacaatgatgtg
caaatgctggaaaagcccaccaagttgatcagtcaacgcaaaactattgaagtcaacgca
caaatccaacgcattgattttgaaggccgctcggatggcgaatcaatgctgaagattctc
tcacagctgaggccgcggcgcgtcattgtggtacacggcacagccgagggcacccaggtg
gtggccaagcactgtgagcagaatgttggcgctcgcgtctttgcgccgcaaaaaggcgaa
ataatcgatgtgacaacagagattcacatttatcaggtgcgcctgaccgagggtctcgtt
tctcagctgcaattccagaagggcaaagatgcggaggtggcctggattgatggtcgcctt
ggtatgcgcctacaggccatcgatgcacccaatcaatcggaagtcactgtggagcaggac
gtggcggcgcaggagggcaaaacgcttacattggaaactctcgaagaagatgaaattccc
gtccacaactcggtgttgatcaacgaactgaaactatccgacttcaaacaggtgctaatg
cgcaacaacattaactctgaattctctggcggcgttctttggtgctccaatggcacactg
gcgctgcggcgcgttgatgccggcaaggtggccatggagggttgtttatcggaggactat
tacaagatacgcgaactgctctatgaacagtatgccattgtatga
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