Drosophila virilis: 6630967
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Entry
6630967 CDS
T01066
Symbol
pit
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvi03041
]
6630967 (pit)
03009 Ribosome biogenesis [BR:
dvi03009
]
6630967 (pit)
Enzymes [BR:
dvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
6630967 (pit)
Spliceosome [BR:
dvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
6630967 (pit)
Ribosome biogenesis [BR:
dvi03009
]
Eukaryotic type
90S particles
Helicases
6630967 (pit)
Pre-60S particles
6630967 (pit)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Nop14
DUF8305
AAA_22
Motif
Other DBs
NCBI-GeneID:
6630967
NCBI-ProteinID:
XP_002053801
UniProt:
B4M0M9
LinkDB
All DBs
Position
2:14809176..14811778
Genome browser
AA seq
670 aa
AA seq
DB search
MSIREKLLMKKIVKREKMKKELSQKKGKGKQAVPEPPAAKSGKTQPKKQKRPVEAEADDL
DDDFQEQPQVKGKKRQQQKKKPQIEVANSDSDSEQDEAESGSASGEDDEDDEEIDSEAAD
SPDSEEDSPVPVKKSKQQPKAVKKAASTNGKATDDDTPFTVESSLSALDQRDSDDRSFAS
LKGAVSEATLQAIAEMGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELI
NKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKG
INILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTM
LFSATQTERIDALSKLALKKEPIYVGVHDNQETATVEGLEQGYIVCPSEKRLLVLFTFLK
KNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTSTFFQFCNAESGILLC
TDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLMLRPEELGFLRYL
KAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQIFNV
NTLDLQAVSKSFGFLVPPVVDLKVGAAKRERPEKRVGGGGFGYYKQMNDSGAKQRHFKQV
NRDQAKKFMR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattagagaaaagcttcttatgaaaaaaattgtcaagcgcgagaaaatgaagaag
gagctctcccagaaaaaaggcaaaggcaagcaggcagtgccggaaccgccagccgcaaag
tccggaaagacccaacccaaaaagcagaagcgacctgtggaggctgaagcagacgacttg
gatgatgattttcaagagcagccccaggtcaaaggaaaaaagcgccagcagcagaaaaag
aagccacaaatcgaggtggcaaactccgattcggactcggaacaggatgaggcagagagc
ggtagtgcgtcaggggaagatgacgaggacgacgaggagatagatagtgaagctgcagac
tcacccgattcagaggaggactcaccggtgccggtcaagaaatccaagcaacagcctaaa
gcagtcaaaaaggctgcctcaacaaatggcaaagctacagatgatgacacgccctttacc
gtagaatcctcattgtcagcattggatcaacgtgattccgatgatcgcagctttgcttca
ctcaaaggcgccgtctctgaggccacattgcaagccattgccgagatgggcttctccgag
atgactgaaattcaggccaagtctttgacgccattactcaagggtcgggatctggtgggc
gctgcccaaacgggctcaggcaaaacgcttgcgttccttatacctgccgtggaattgatc
aataagctgcgttttatgccgcgcaacggcacgggcgttattattatctcgcccacacgg
gagctgtccatgcaaacgtttggtgtgctcaaagagctaatggcacatcatcatcacacc
tatggcttggtcatgggtggctccaatcgtcaggtggagagcgaaaagctgggcaaaggc
attaacattctggtggccacgccgggtcgtctgttggatcatctgcagaattcaccggat
ttcctatacaaaaacttgcagtgtttgattattgatgaagtggatcgcatattggaaatt
ggtttcgaggaggaactgaaacagatcattaatttgttgccaaaacgccgccagacaatg
ttgttttcggccacacagacggaacgcatcgatgcgctttccaagctggcgctgaaaaag
gagccgatctatgtgggcgtgcacgataaccaagagacggctaccgttgagggcctcgag
caaggttacattgtttgcccatcggagaagcgtttgctggtgctttttacgttcctaaaa
aagaatcgcaagaagaaggtcatggttttcttttcctcgtgtatgtcggtcaagtatcat
cacgaactcttcaactacatcgatctaccggtcacttccattcatggaaaacagaagcaa
acgaaacgcacctcgaccttcttccaattctgcaatgccgagtcgggcattttgctctgc
acggatgtggcagcacgtggtctagatataccgcaagtcgattggattgtgcagtacgat
ccgccagatgatccacgcgaatatattcatcgtgtgggtcgtacggcacgcggctcaggc
acatctggacatgctctgctaatgttaagacccgaggaattgggcttcttgcgctatctg
aaggcagccaaggtgccgctcaatgaatttgagttctcctggcaaaagattgccgatata
cagctgcagctagagaagttgatagcgaaaaactatttccttaatcagtcagctaaggag
gcctttaagtcgtatgtacgcgcctatgactcgcatcagctaaaacaaatattcaatgtg
aacacactggacttgcaggcggtttccaaaagctttggctttctggtgccgcctgtggtt
gacctcaaagtaggcgctgccaagcgagagcggcccgagaagcgtgtgggtggcggcggt
ttcggctactataagcaaatgaacgacagcggtgccaagcagcgccactttaagcaggtc
aatcgcgatcaggccaagaagtttatgcgttaa
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