Drosophila virilis: 6632583
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Entry
6632583 CDS
T01066
Symbol
Cpsf73
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dvi
Drosophila virilis
Pathway
dvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6632583 (Cpsf73)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6632583 (Cpsf73)
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6632583 (Cpsf73)
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6632583 (Cpsf73)
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6632583 (Cpsf73)
U7-dependent histone pre-mRNA processing factors
6632583 (Cpsf73)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
6632583
NCBI-ProteinID:
XP_002056223
UniProt:
B4M3X4
LinkDB
All DBs
Position
2:28107448..28109943
Genome browser
AA seq
686 aa
AA seq
DB search
MSQAQTNSDTRVPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIK
ISNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFMIEIAGI
KILYTGDFSRQEDRHLMAAEVPPKKPDVLITESTYGTHIHEKREDRESRFTSLVQKIVMQ
GGRCLIPVFALGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDR
IRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRMLRPN
HVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGHLAA
KKPEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWTSSLATLQLLLDR
IGAGCVEVVEPERKLRVFNCVELTVEQKIIVMEWHATHVNDVYADAVLACLMQSELGGTN
IKGATKQTKSEESRFRECLIETLQDTFGDSCVPKMFKGDLLPVIVSGKHAEINLDTLTVQ
CAEDEVLRQMLNTTVQKLHQTLVSAY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggcccaaacaaatagtgacacacgcgtgcctgatgaggagagcgatctgctg
caaattaagccactcggagctggccaggaagtggggcgctcctgcatcatgctggagttc
aagggcaaaaagataatgctggactgtggcatacatcccggtctgtccggcatggatgcg
ctgccctatgtggacttgatagaagctgacgaaattgatttgctgtttatatcccatttc
cacttggatcactgcggcgctctgccctggttcctcatgaagaccagctttcgtggacgc
tgctttatgacacacgccaccaaagccatttaccgctggatgctctcagattatattaaa
atcagcaatatatccacagagcaaatgctctatacggaagctgatctggaggcttccatg
gagaaaatcgagacaatcaattttcacgaggagcgcgatgtaatgggcgtgcgcttttgc
gcctataacgctggtcatgtgctcggcgcagctatgtttatgattgaaatcgcaggcatc
aaaattctgtatacgggcgacttttcgcgacaggaggatcgtcatttgatggccgccgag
gtgccgcccaagaaacccgatgtactgattaccgaatctacctacggcacacacatacac
gaaaagcgcgaagatcgtgagagtcgcttcacatcgctggtgcagaagattgtgatgcag
ggcggccgctgcctcattccggtgtttgccttgggtcgagctcaggagctgctgttgata
ttggatgagttctggtcacagaatcccgatttgcacgagatacccatctactatgcctcc
tcgctggccaagaagtgcatggccgtctaccagacatatatcaatgccatgaacgatcgc
atacgtcgccagattgccgtgaacaatccatttgtctttcgtcacatttccaacctgaag
ggcatcgatcactttgatgatattggaccttgtgtgatcatggcctcgccgggtatgatg
cagtcgggcctttcgcgtgagctcttcgagagctggtgcacagatcccaagaatggcgtc
attatagccggttactgtgtggagggcacactggccaaaaccatattgtccgagccggag
gagattacaacgctttctggccaaaaactgccgctaaacatgtccgttgactacatatcc
ttctcggcgcacacagattaccaacagactagcgaatttatacgcatgttgcgacccaat
cacgtggtgctcgtccacggcgaacaaaatgaaatgtctcgcctgaagctggcgctgcag
cgtgaatatgaagcagacgccagcacggacatcaaattctataatccccgcaatacgcac
gccgtcgatctctatttccgtggcgagaaaacggccaaggtgatgggccatctggcggct
aagaaaccggaggtgggcagcaaactctctggcgtgctggtcaagcgcgatttcaagtac
catttgctggcaccctccgatcttggcaagtacacggacatgagcatgtctgtggtcacg
cagcgtcaatcgattccctggactagttccctggccacactccaactcctgctggatcgc
attggagctggttgcgtagaggttgtcgagccggagcgcaagctgcgcgttttcaattgc
gtcgaattgactgtggagcagaagatcattgtcatggaatggcatgcaacgcatgtgaac
gatgtctatgcggacgcagtgctagcctgcctcatgcagtccgagctgggcggcacaaat
atcaagggtgccaccaagcaaaccaaatcggaggaatctcgattccgcgaatgcctcatt
gagacgctacaggacaccttcggcgacagctgtgtgcccaagatgttcaagggtgatctg
ctgccggttatagtcagtggcaagcatgctgaaattaatctagatacattgacggtgcaa
tgtgccgaggatgaggtgctgaggcaaatgctaaataccaccgtgcagaagctacaccaa
acattggtgtctgcttattga
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