Drosophila virilis: 6633330
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Entry
6633330 CDS
T01066
Symbol
sno
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dvi03036
]
6633330 (sno)
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
6633330 (sno)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
6633330
NCBI-ProteinID:
XP_032296545
LinkDB
All DBs
Position
X:10119962..10146911
Genome browser
AA seq
1775 aa
AA seq
DB search
MTSKKRKTFLDTDENDDFDDDDSGSDFDDDEDPDQIEVPGGGRDLNTAVTYAQNIRSGVG
INVNKQANSAPSGSHSGSNISAAFLKLGNNNNNNNNNNNISSSSSNNSHNNNNNNKVNSS
ISKPTSLLLSNNSNSSNISNNNNNNNNSNISSNSINNNNISVLRPTIVTHTTKTAIAGGK
FTALPTTITTKVAIDKSLNNNMPKKLTAAALGNASGTNTATTRISGTAGGNPGSSTNSSH
LSAASAYLSSGAGNYLNSLSTNDLMSLAAYVASKGAPNGNNNNNNNINSSSSSSNNNNNN
NSSYFSGSGGGASTSAASAANFNMAASLLAQMSYAGAATPMRAPYKLPPGSMPQSAAASA
VKSSSSSSSGATATAAAAAGVGGGGMKVNTMMLEKLQKLIALNPEYLTSGIPNHVMTQLF
MQPMRMPQQQQQQQQQLQQQQQQLQQLQLQNAAVANANAATAAAAAAAASAAVYVQQEED
EVDYEEMGVAETYADYWPAKLKLGKKHPDAVVETASLSSVEPCDVYYKLSIPAETINSGQ
LSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKKALWI
SVSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDANNNCKRGVIFSTYSALIGESN
NKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPK
ARVVYASATGASEPKNMAYMVRLGLWGQGTAFGSFGDFITAVERRGVGAMEIVAMDMKLR
GMYIARQLSFKGVSFKIEEVPLSKEFRRIYDQSVELWVEAMQKFTEAAELIDAESRMKKT
MWGQFWSSHQRFFKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDG
ELTDFVSTAKGVFQSFVERHFPAPDRNRINRILGLYDETPPVKHEPHSLLNNNNNNNNNN
NNSSSGGGGGGVGGGSSSSSRSKRKGAGNGSGSGRKTKKKKRSGSWQYSDSDEEAAHTSS
GDLDNNSDDAADSDDACDEEHEGNDNDDDDDDENENENADDDENENEDDDEDKHDGDSDR
HSVASDYSSDFNPFFMSGSDSDIDPWVNARSKKSSGSANKKTQKKSKKKKGLKKEPKIKK
EPATGAPSASSNNNNNNNNNNATMSATVVAALNAAKSRKPQQQSTQDKIQDLLQKKQELK
GTMTPVGVNGVKLNYGPPPKDAIERACTMKEELLRKIERLGARLPPNTLDQLIDELGGPD
NVAEMTGRRGRVVQSDDGSIQYESRTESDVPLETLNITEKQRFMDGQKDVAIISEAASSG
ISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRF
ASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQALETVMRTIMGYETPLVPPPT
DYSGEFFKDIAGALVGVGIIVNSESHPGVLSLDKDYNNISKFLNRILGCPVDLQNRLFKY
FTDTMTAIINQAKRGGRFDLGIVDLGAAGENVTRVRLMRFMRKHATGVAPTELHTVRVER
GMIWQEAIDKYADLFNEHEGFYTSHQLRNQKRTAILVVVIEQQPARSSTDADSSSSGSSK
AQKKKSRSKKEIMCQIYRPNTGLQVRHESLAELEKKYRKVASEEAEPHWTEQYDASVHTC
SHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRSNSKMQVIRMKT
TEGEKIVGTMIPKSCFEPLMNDLRSDSEKQEEFNY
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaagaagcgtaaaacctttttggacaccgatgagaacgacgacttcgatgac
gatgattctggctctgattttgatgatgatgaagatccagatcaaatagaagtgcccggt
ggcggtcgtgatctaaatactgcagttacctacgcgcaaaacattcgcagcggtgttggc
atcaacgtcaacaagcaggcgaatagcgcaccaagtggcagtcacagcggcagcaacata
agcgccgcctttctcaagttgggcaacaacaacaataacaacaacaacaacaacaacatc
agcagcagcagcagcaacaacagccacaacaacaacaacaacaacaaagtcaacagcagc
attagcaaaccgacctcattgctgctcagcaacaacagcaacagcagcaacattagcaac
aacaacaacaataacaacaacagcaacattagcagcaacagcataaataacaacaacatt
tccgtattgcggccaacaattgtgacgcatacaacaaaaacagcaattgcgggcggcaaa
tttacagcgttgccaacaacaataacaacaaaagttgccattgataagagcctaaacaac
aacatgccaaagaaattgacggcagccgcattgggcaacgccagcggcacaaataccgca
acgacaaggatcagcggcacagcgggtggcaaccctggcagcagcaccaatagcagccac
ttgagtgctgccagcgcctatttgagcagcggcgccggcaactatttgaacagcctcagc
accaacgatctgatgagtctcgccgcctatgttgcctccaagggggcgcccaatggcaac
aacaacaacaacaacaacatcaacagcagcagcagcagcagcaacaacaacaacaacaac
aacagtagctacttttcgggcagcggcggtggcgcttcaacttcagccgcctctgctgcc
aattttaatatggccgcgtctttattggcgcagatgagctatgcgggcgctgccacgccc
atgcgtgcaccgtacaagctgccgccgggcagcatgccacaaagcgctgccgccagcgca
gtcaagagtagcagcagcagcagcagcggcgcaacggcaacagctgcagcagcagcgggc
gtcggtggcggcggcatgaaggtgaacaccatgatgctggagaagctgcaaaagctgatc
gccctcaatccggagtacttgaccagcggcatacccaaccatgtgatgacgcagctgttc
atgcagccgatgcgcatgccgcagcagcagcagcagcaacagcagcagctgcagcagcaa
cagcaacagttgcagcagctgcagctgcagaatgcggccgttgcgaatgcgaatgcggca
acggcagctgccgccgcagcggctgcctcggcggccgtctatgtccagcaggaggaggat
gaggtggactatgaggagatgggcgtggccgaaacatatgccgactattggccagcaaag
ctcaagctgggcaagaagcatccggatgcggtcgtggagaccgcctcgcttagctccgtg
gagccgtgtgatgtctactacaagctgtcgatacccgccgagacaattaacagcggccag
ctgagcgccctgcagctggaatccatcacgtacgcatcccaggcgcacgatcatctcctg
cccgatggcagtcgtgccggcttcctgattggcgatggcgccggcgttggcaagggtcgc
accattgccggcatcatctacgagaactacctgaaggggcgcaagaaggccctctggata
tccgtttccaatgatctcaaatacgatgcggagcgcgatctcagcgacattggagcgacg
cgcatcgaggtccatgcgctcaataagttcaaatatgcgaagatcagctcggatgcgaac
aacaattgcaaacgcggcgtcatcttcagcacgtactcggccctgattggcgagtcgaac
aacaagacgggcaaatatcgttcgcggtttcggcagctgttgcagtggtgcggcgaggac
tttgagggtctcatcatattcgatgaatgccacaaggcgaagaatctgtgcccggtgggc
tccggcaagccaacaaagacaggccaaacggtgctcgagctgcagcagaagctgcccaag
gcgcgagttgtttatgcctcggcgacgggcgcctcagagccaaagaacatggcctatatg
gttcgcctgggcctgtggggacagggcacagcctttggcagtttcggtgattttattacc
gccgtcgagcgtcgcggcgtcggcgccatggaaattgtggccatggacatgaagctgcgc
ggcatgtacattgcccgccagctgagcttcaagggtgtcagttttaagattgaggaggtg
ccgctctccaaggagtttcgacggatctatgatcagagcgttgagctttgggtggaggcc
atgcaaaagtttacagaggccgccgagctcatcgatgccgagagccgcatgaagaagacc
atgtggggtcagttctggtcctcgcatcagcgcttcttcaaatatctatgcattgcggcc
aaggtcaaccatgcggtgcttgtcgcccgcgagtccatcaaatatggcaagtgtgttgtc
atcggccttcagtccaccggcgaggcgcgcaccctcgatcagctggagcgcgacgatggt
gaactgaccgattttgtgtccacagccaaaggcgttttccagtcgtttgtggaacggcat
tttccggcgcccgatcgcaatcgcatcaatcgcattttgggcctctacgacgagacgccg
cccgtgaagcacgagccgcacagtctgctcaacaacaacaacaataataataataacaac
aataacagcagcagcggcggcggcggcggcggcgttggcggcggcagcagcagcagcagc
cggagcaagcgaaagggcgccggcaacggcagcggcagcgggcggaaaacaaaaaagaag
aagcgcagcggctcctggcaatacagcgacagcgacgaggaggcggcgcacacatccagc
ggcgacctggacaacaacagcgacgatgcagcggacagcgacgatgcctgcgacgaggag
cacgaggggaacgacaatgacgacgacgatgacgatgagaacgagaacgagaacgccgac
gatgatgagaacgagaacgaggatgatgatgaggacaagcatgatggggacagcgatcgg
cacagtgtcgccagcgattatagttccgatttcaatccgtttttcatgagcggcagcgac
agcgacatcgatccctgggtgaatgcgcgcagcaaaaagtccagcggcagcgccaacaag
aagacccaaaagaagtccaaaaagaagaagggcctgaaaaaggagccgaaaatcaaaaag
gagccagccaccggtgcaccttcagcgagcagcaataacaacaataacaataacaataac
aatgcgaccatgtccgccacggtggttgccgctttgaatgcggcgaaaagccgcaagcca
cagcagcagtcgacgcaggacaagatccaggatctgttgcaaaagaaacaggagctcaag
ggcacaatgacaccggtgggcgttaatggggtcaaactgaactatggcccgccgcccaag
gatgccatcgaacgggcctgcaccatgaaggaggaactgttgcgcaaaatcgaacgtctc
ggcgcccggctgccgcccaacacattggatcagctaatcgatgagttgggcggtcccgac
aacgttgccgaaatgacaggcaggcggggacgtgtcgtccaaagcgacgatggctccata
cagtatgagtcgcgcacagaatcggatgtgccgctcgagacgctcaacataaccgaaaag
cagcgctttatggacggccaaaaggatgttgccatcatatcggaggccgcctccagcggc
atctcgctgcagagcgatcgacgcgtcttcaatcagcgacggcgcgttcacatcacactc
gagctgccctggtctgccgatcgggccatacagcaattcggacgcacgcatcgctccaat
caggtgaacgcgcccgaatatatatttctcatctcggatctggcgggcgagcggcgtttc
gcgtcgacggtggccaagcgactcgaatcgctgggcgccctcacacacggcgatcgtcgg
gccacggagacgcgcgatctctcacagttcaacattgacaacaagtatggccggcaggcc
ctggagacggtcatgcgcaccattatgggctatgagacgccgctggtgccgccgccgacc
gattatagcggcgaattctttaaggatattgccggcgccttggtcggcgttggcattatt
gtgaacagcgagagccatccgggcgtgctcagcctggacaaggactacaataacatatcc
aagtttctcaatcgcattctcggctgtcccgtcgatctgcagaatcgtctattcaagtat
ttcacagataccatgacggccatcatcaatcaggccaagcgcggcggtcgcttcgacttg
ggcattgtcgacttgggcgctgccggcgagaatgtgacccgtgtgcgtctgatgcgtttt
atgcgcaagcatgccacgggcgtggcacccacagagctgcacacggtgcgcgtggagcgc
ggcatgatatggcaggaggccattgacaagtatgcggatctgttcaatgagcacgagggc
ttctacacgtcgcatcagctgcgcaatcagaagcgcaccgcaatcctggtggttgtcatc
gaacagcaaccggcgcgcagttccacggatgcggacagcagcagcagcggcagcagcaag
gcgcaaaagaagaagtcgcgcagcaagaaggagatcatgtgccagatatacaggccaaat
acgggactgcaggtgcgacacgaatcgctcgccgagctcgagaagaaatatcgcaaggtg
gccagcgaggaggccgaaccgcattggaccgaacagtacgatgcctcggtgcacacctgc
tcgcacgcctactggaacggcaactgtcgcaatgtcagtctgggcaacgattgcgaggtg
ggcttgcgtcagcgtctctatcatgtgctcgccggctcggtgctgtcggtgtggggccgt
gtcgagcatatactgaatacgcgctccaatagcaaaatgcaggtgatacgcatgaagaca
accgagggcgaaaaaatagtcggcaccatgataccaaagtcatgctttgagccgctcatg
aatgatctgcgcagcgactccgagaagcaggaggaattcaactattaa
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integrated database retrieval system
